Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01837 ATGCAGTTATTTCAGAAACACACAAAAGCACAATTTTTGATTAATTTTATATTAGTAGCATCTTCATTTTGTGGCTTTTATGTCATTGTATCAGTCCTAATATTAGGTACTTCACATCAAAATCTATTAGTACATTTGCAACATTCTTCATCAAACGATGGGTCAGAGACCGCAACCGCAGCTGCAACCGCAATCACTAACACAAGTCTAGATCATATAGTATTTGGAATTGCTGCAAGCAAAAGTTCGTGGACAAAGAGAAAAGAGTATGTCAAACTATGGTGGAAAAACAACAATACAATGAAGGGCTGTGTTTTCTTGGATAGTCTACCTAAAAATAATGAAGACCCTTCTCTTCCTCCTTTATGTCTCTCTCAAGACACGTCGCGGTTTCGATACACTTGCAGCGGGGGGCTTCGATCAGCAATTCGAGTTGCGCGCGTGGTTGTGGAAACGGTGGCCTTGAATCATACAGGTGTGAAGTGGTATGTGTTTGGAGACGACGACACAGTATTCTTCCCGGAGAATTTGGTGAAGACTTTATCTAAATATGATCATGAGCTGTGGTATTATATTGGTGCGAATTCGGAGATTTATGAGCAGAATCGTTTGTTTGGGTTTGGAATGGCTTTTGGTGGTGCTGGTTTTGCTATTAGTTCTTCTCTGGCTAAGGTTTTGGTTAAGGTTTTTGATTCTTGTTTGGAAAGGTATCCTCATCTTTATGGAAGTGATGGCAGGATTCACTCTTGTTTAGCAGAACTTGGTGTTGGATTGACACATGAACCAGGTTTTCATCAGGTTGATTTAACTGGAAACACCTTTGGCCTATTAGCAGCACATCCGGTAACTCCTTTAGTATCTCTACACCACTCAGATTACACAGATCCAATCTTTCCAAAAATGTCAAGAACACAAGCTCTCCAACATTTATTCAAAGCAGTAAATGTTGATTCTCAAAGAATCCTGCAACAAACAGTTTGCTATAACAAAAAGTTTTCATGGACAGTTTCAGTATCATGGGGTTATGCCGTTCAAATATTCACAGACCATATGTTTTTACCAGAAGCTGTCAACGTGCAAGAAACATTCAAACAATGGAAAAATGGAAATGTGTTAGCAAAAACTTATATGTTCAATACAAAACCATTTGACTCTAATCCTTGTGAAAGACCCACCATTTTTTATCTTGATAGTGTCTCTTCTGGCAAGAATGGTGTCATAACCAGTTATTATAAGAGATTTTTACGAGATTGCCGAAAGGAACGGGGCTCGCCGAACAAACTAGAAGTTATCAAAGTGGTCTCTAATAAGCTAGACCTTAACATCAAACAGTTGCAGGCTCCAAGAAGGCAATGTTGTGACATATTGCCATCAAGTGCTGGTGACAAACTGGACATTGCTGTTAGAGAATGCAAAGATGATGAATTGATTTATATGCACTGA 1443 0.3881 MQLFQKHTKAQFLINFILVASSFCGFYVIVSVLILGTSHQNLLVHLQHSSSNDGSETATAAATAITNTSLDHIVFGIAASKSSWTKRKEYVKLWWKNNNTMKGCVFLDSLPKNNEDPSLPPLCLSQDTSRFRYTCSGGLRSAIRVARVVVETVALNHTGVKWYVFGDDDTVFFPENLVKTLSKYDHELWYYIGANSEIYEQNRLFGFGMAFGGAGFAISSSLAKVLVKVFDSCLERYPHLYGSDGRIHSCLAELGVGLTHEPGFHQVDLTGNTFGLLAAHPVTPLVSLHHSDYTDPIFPKMSRTQALQHLFKAVNVDSQRILQQTVCYNKKFSWTVSVSWGYAVQIFTDHMFLPEAVNVQETFKQWKNGNVLAKTYMFNTKPFDSNPCERPTIFYLDSVSSGKNGVITSYYKRFLRDCRKERGSPNKLEVIKVVSNKLDLNIKQLQAPRRQCCDILPSSAGDKLDIAVRECKDDELIYMH 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01837 480 Gene3D - 61 336 - -
Vivi5g01837 480 Pfam Protein of unknown function, DUF604 201 453 IPR006740 -
Vivi5g01837 480 PANTHER FRINGE-RELATED 17 477 - -
Vivi5g01837 480 FunFam Fringe-related protein-like 60 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01837 Vivi-Chr5 68467851 68470970 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01837 57 480 Glycosyltransferase AT4G15240 52.471 1.52e-158 457
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01837 - - vvo:131632357 776.548
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g06804 2 207191356 207193770 Vivi5g01837 5 68467851 68470970 PCT
Vivi5g01837 5 68467851 68470970 Vivi2g06807 2 207221909 207223949 PCT