Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g01839 ATGATGTTCCACAGAAGAAAAAAGGAACCAAACGCATTACCTCTTTCAAACTCACCCCAACAATCACACTCACCAAGTTCACCAATGCCTTCGAATTTTACTTCAGCTTTTTCCAGATTCAGAATTTCAACACTAACCTCTTTCATATTACTTCTTTCATTACTTCTTAATTTTTATTTCCTTTTAATTCTGTGGGCCCCACACTCCGCCGATTTATCACCTTCCGCCGTCGTATCTCGTTTCTCTCCAACCACGCGCCGCCATGTTCTCTTCTCCATCGCTTCGTCTTCTCTCTCATGGCAACACCGTCAGTCTTACGTTCATCTCTGGTATTCCGCTAAATCCACCCGCGCGCTGGCGTTTCTTGACTCGCCGCCGGTTAATTCATCTCCTCTGTCTCCGCCGGTTGTGATCTCCGGCGACGCGTCTGGATTTCCGTATACTTTGCAGGGAGGGCTTCGGTCGGCGATCCGTGTGGCGAGGGTTGTGAAGGAGGCGGTGGATCGGAACGAAACGGATGTTCGGTGGTTTGTGTTTGGGGATGATGATACGGTTTTCTTTGTGGAGAATGTTGTGAAGACGCTTTCGAAGTATGATCATGATCGGTGGTTTTACGTCGGGAGTAACTCGGAGAGCTATGATCAGAACACTATGTATTCGTTTGAGATGGCGTTTGGTGGAGGTGGTTTTGCGATTAGTCATTCGCTTGCGAAGGTTTTGGCTAGGGTTTTGGATTCTTGTTTGAGGAGGTATGGGTTTTTGTATGGGAGTGATGCTAGGATCTATTCTTGTGTTGCTGAGCTTGGTGTAACTTTGACTCACGAACCTGGATTTCATCAGTTAGATATGCGGGGGAATTTGTTTGGGGTGCTGGCGGCACATCCATTATCTCCTTTGTGTTCCCTTCATCACTTGGATGCTGCAGAGCCTATCTTTCCGGACATGAATAGAACACAAGCTTTGGGACATCTTATTGCTGCTACAAATGTCGATCCCGCAAGAATTCTGCAGCAAACTGTCTGCTACGACCGATCGAGTTCTTTGACTTTCTCAGTTTCTTGGGGTTTTGCTATCCAAGTTTATCAAGGAAATGTACTTCTGCCTGATCTCCTTGCAGTAAAAAAAACATTTGCGCCGTGGAGGAAGATTCATTCCAATTTCATGCTTGACACTAAAGACTATCCTAGAGATCCTTGTAAAAGGCCTTCTATATTTTTCTTGAAAAGTGTTGAATCCGATAAAAAGGGCATTTGGAGCAATTACACTAGACATGTAGAAAAAAAGTGCCCTAAATCAAATCCTAACCTGCCGAATAAGATCACAGTTTATTCAAGAAAGTTGGATCGTAGTATTGAAGAGATAAAAGCTCTCCGTCGTGAGTGCTGCAGCGTTTTCCCATCTTCGAATGAAACAATCAGTATTCGTATTAGACAGTGCGGAAACAATGAACTGATATCAATGGAATCATAG 1470 0.4442 MMFHRRKKEPNALPLSNSPQQSHSPSSPMPSNFTSAFSRFRISTLTSFILLLSLLLNFYFLLILWAPHSADLSPSAVVSRFSPTTRRHVLFSIASSSLSWQHRQSYVHLWYSAKSTRALAFLDSPPVNSSPLSPPVVISGDASGFPYTLQGGLRSAIRVARVVKEAVDRNETDVRWFVFGDDDTVFFVENVVKTLSKYDHDRWFYVGSNSESYDQNTMYSFEMAFGGGGFAISHSLAKVLARVLDSCLRRYGFLYGSDARIYSCVAELGVTLTHEPGFHQLDMRGNLFGVLAAHPLSPLCSLHHLDAAEPIFPDMNRTQALGHLIAATNVDPARILQQTVCYDRSSSLTFSVSWGFAIQVYQGNVLLPDLLAVKKTFAPWRKIHSNFMLDTKDYPRDPCKRPSIFFLKSVESDKKGIWSNYTRHVEKKCPKSNPNLPNKITVYSRKLDRSIEEIKALRRECCSVFPSSNETISIRIRQCGNNELISMES 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g01839 489 Gene3D - 78 304 - -
Vivi5g01839 489 FunFam Fringe-related protein 78 317 - -
Vivi5g01839 489 Coils Coil 440 460 - -
Vivi5g01839 489 MobiDBLite consensus disorder prediction 13 30 - -
Vivi5g01839 489 PANTHER FRINGE-RELATED 45 485 - -
Vivi5g01839 489 MobiDBLite consensus disorder prediction 1 30 - -
Vivi5g01839 489 Pfam Protein of unknown function, DUF604 215 462 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g01839 Vivi-Chr5 68534154 68537117 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi5g01839 84 489 Glycosyltransferase AT4G15240 62.044 0.0 534
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g01839 - - gmx:100813277 623.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi5g01839 5 68534154 68537117 Vivi5g01839 5 68534154 68537117 ECH
Vivi5g01839 5 68534154 68537117 Vivi2g06804 2 207191356 207193770 PCT