Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03970 ATGTCGGTTGCTGGTGTTGCTCTCAGACCGATTTTAAAAGAATCGGCAAATTCTCAATTTCACCGGCAAGAACGAATTGCTCGTTGTTCTAGCGAATCTATTTTGATCTACCTTACTGTCGACGGAGCCGTTACGCCGTTGCGCGTTCTCGAATCCGATTCAATTGCTTCGGTGAAAATGAGGATTCAGACGAGGAATGGCGTATCCGAGAAGAAACAGTTGCTGGTTTCGAATGGTAGAGAGTTGGCGCGGAACAATAACCTTGTTAAGGAATACGGTGTTACTGCTGGGAATGTTGTTCATATGGTTCTTCGGTTGTCTGACATGATTTTCATAGTTGTGAGGACGATGTGTGGTAAGGAGTTTGAATTGAAGGTTGATAGGCGTAGGAATGTAGCGCATTTGAAGCATTGTATTAAGAAGAAAGGGAAAGGTTTTATTGATCTTGTGGAGGATGAACAAGAGTTTTTTTGCTGTGGCCAGAAGCTTGATGAGAAGAGGATTTTTGATGATATTTGTAAGAATGATGATGATGTTATTCATCTCATTGTTAAGAAATCTGCGAAAGTTAAGGCTACGGTTGCTCGTAATAAGGATTTGGAGCTTTCGGTTGTTGCGGAGGATTTGAATCTGAATGAGCAGAAGCAGAATGAGATAGTTAAGGTTATAGAAGAACAGCGCCGTGGCGGTGTTGTTGATTTTTGGTTAGAGCCGTTTTTTGTTAATCCTAGGATCAATTTTTTGCCTTTCCTGTGGGATATGATAGATTCAACTTTTAATGGTTTGAAAAATGGGAATAAGCCTGTTAGATCTTCTGAGGGAACGGGTGGGGCTTACTTTATGCAAGATTCGAGAGGTGTGGAATATGTTTCTGTTTTCAAACCGATTGATGAGGAACCAATGGCTGTTAATAATCCGCGTGGGTTACCGGTTTCGTCGAACGGAGAGGGTTTAAAGAGAGGGACAAAGGTTGGTGAAGGAGCTGTGAGGGAAGTTGCAGCGTATATACTGGATCATCCGAAGGCTGGCCCGCGTTTGGCGTCGGGCGAAGCAATTGGTTTTGCTGGTGTTCCGCCTACTGTTTTGGTTCGGTGTTTACATGAAGCGTTTAATTACCCTAACGATGGGGATTGTGGCTCTTTGATGATGGATCGGAAGGTGGGATCTTTGCAGAAGTTTATGAGTAATGATGGGAATTGTGAGGATATTGGACCTGGTGCTTTTTCTGTGGCAGAGGTGCATAAGATCAGTGTGCTTGATATAAGAATGGCTAATGCAGATAGGCATGCAGGGAATATATTGTTTAGGAAAGAGTCAAGTGGCGAGACTCTGCTCATTCCCATTGATCATGGCTACTGTCTTCCTGAGAAATTTGAGGATTGCACATTTGATTGGCTTTACTGGCCTCAAGCGCGTCAGCCATACTCTCCTGATACAGTTGAATATATAAACACTCTGGATGCTGAAAAAGACATCGAACTTCTGAAATATTATGGTTGGGATGTTCCAGTTGAGAGTGCAAGAACACTCCGCCTCTCCACAATGTTATTGAAGAAAGGGGTTGAGAGAGGTCTCACTCCCTTTGCTATTGGAAATATCATGTGTAGGGAAAATTTGAACAAGAAATCAGTAATTGAGGAGATTGTTTTTGAAGCGCAGGAATCATTGCTCTCCGGCATGGATGAATCTGCTTTTCTAGAATTTGCATCGCAGATCATGGATTCCCGCCTTGGTGAGCTTTCGAAATAG 1749 0.4294 MSVAGVALRPILKESANSQFHRQERIARCSSESILIYLTVDGAVTPLRVLESDSIASVKMRIQTRNGVSEKKQLLVSNGRELARNNNLVKEYGVTAGNVVHMVLRLSDMIFIVVRTMCGKEFELKVDRRRNVAHLKHCIKKKGKGFIDLVEDEQEFFCCGQKLDEKRIFDDICKNDDDVIHLIVKKSAKVKATVARNKDLELSVVAEDLNLNEQKQNEIVKVIEEQRRGGVVDFWLEPFFVNPRINFLPFLWDMIDSTFNGLKNGNKPVRSSEGTGGAYFMQDSRGVEYVSVFKPIDEEPMAVNNPRGLPVSSNGEGLKRGTKVGEGAVREVAAYILDHPKAGPRLASGEAIGFAGVPPTVLVRCLHEAFNYPNDGDCGSLMMDRKVGSLQKFMSNDGNCEDIGPGAFSVAEVHKISVLDIRMANADRHAGNILFRKESSGETLLIPIDHGYCLPEKFEDCTFDWLYWPQARQPYSPDTVEYINTLDAEKDIELLKYYGWDVPVESARTLRLSTMLLKKGVERGLTPFAIGNIMCRENLNKKSVIEEIVFEAQESLLSGMDESAFLEFASQIMDSRLGELSK 582
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03970 582 Pfam Phosphatidylinositol 3- and 4-kinase 274 529 IPR000403 -
Vivi2g03970 582 Gene3D - 111 201 - -
Vivi2g03970 582 ProSiteProfiles Ubiquitin domain profile. 36 109 IPR000626 GO:0005515
Vivi2g03970 582 SUPERFAMILY Ubiquitin-like 38 107 IPR029071 -
Vivi2g03970 582 SUPERFAMILY Protein kinase-like (PK-like) 417 580 IPR011009 -
Vivi2g03970 582 PANTHER PHOSPHATIDYLINOSITOL 4-KINASE GAMMA 44 555 IPR044571 -
Vivi2g03970 582 Gene3D - 13 109 - -
Vivi2g03970 582 SMART ubq_7 110 185 IPR000626 GO:0005515
Vivi2g03970 582 SMART ubq_7 34 105 IPR000626 GO:0005515
Vivi2g03970 582 CDD Ubl_ubiquitin_like 112 183 - -
Vivi2g03970 582 Pfam Ubiquitin family 40 106 IPR000626 GO:0005515
Vivi2g03970 582 Pfam Ubiquitin family 112 186 IPR000626 GO:0005515
Vivi2g03970 582 ProSiteProfiles Ubiquitin domain profile. 110 189 IPR000626 GO:0005515
Vivi2g03970 582 ProSiteProfiles Phosphatidylinositol 3- and 4-kinases catalytic domain profile. 265 564 IPR000403 -
Vivi2g03970 582 SUPERFAMILY Ubiquitin-like 106 186 IPR029071 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03970 Vivi-Chr2 152372345 152375656 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi2g03970 1 581 Acyl Lipid Metabolism Gene Families AT5G24240 53.093 0.0 608
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03970 - - gmx:100787492 826.239
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03970 2 152372345 152375656 Vivi2g03970 2 152372345 152375656 ECH
Vivi2g03970 2 152372345 152375656 Vivi7g04253 7 110999631 111002352 ECH
Vivi2g03970 2 152372345 152375656 Vivi5g06068 5 165751071 165754059 PCT