Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi2g03632 ATGTACAGAGGAGGCGTTGGATCCAAAGCCGAGGTTGCTTCCGTTGATCGGAAACGAATCAACGACGTCCTCGATAAACAACTCGAACGATCCTCGCCGTCCACTTCCAGAACCATCAACGGTAAAGATAGGTCCTCCTCTTCCTCTCTCTTAACCGCCGCTAAGGATCATAGGGACCCTCGCCCCGGTTCCGCCGTTATTCCGAAAAATCCAAACGCTTCCGATGAGGAATCTGAAACGGATAGTGAAGAGTCTGATGTTAGTGGTTCCGATGGGGATGACACGTCTTGGATCTCATGGTTTTGCAATTTGAGAGGAAATGAATTCTTTTGTGAGGTTGATGATGATTACATCCAAGACGATTTCAATCTGTGTGGATTGAGCAGTCAAGTGCCTTATTATGATTATGCTCTTGATTTAATTTTGGATGTTGAATCCTCCCATGGTGACATGTTTACCGAGGAACAAAATGAGTTAATTGAATCAGCAGCAGAGATGCTTTATGGTATGATTCATGCCCGGTATATATTGACCAGCAAAGGAATGGCTGCCATGCTGGACAAGTACAAGAATTATGACTTTGGCAGATGCCCAAGAGTTTACTGCTCTGGACAACCTTGCCTTCCAGTTGGTCAGTCCGACATTCCTAGGTCTAGCACTGTGAAGATATATTGCCCAAGATGTGAAGACATTTACTATCCTCGGTCCAAGTATCAAGGCAACATTGATGGAGCCTATTTTGGTACTACATTTCCCCACCTGTTCCTGATGACCTACGGACAACTGAAGCCACAGAAACCATCACAGAACTATGTTCCGAGAGTTTTTGGATTCAAGCTTCACAAACCATGA 852 0.4495 MYRGGVGSKAEVASVDRKRINDVLDKQLERSSPSTSRTINGKDRSSSSSLLTAAKDHRDPRPGSAVIPKNPNASDEESETDSEESDVSGSDGDDTSWISWFCNLRGNEFFCEVDDDYIQDDFNLCGLSSQVPYYDYALDLILDVESSHGDMFTEEQNELIESAAEMLYGMIHARYILTSKGMAAMLDKYKNYDFGRCPRVYCSGQPCLPVGQSDIPRSSTVKIYCPRCEDIYYPRSKYQGNIDGAYFGTTFPHLFLMTYGQLKPQKPSQNYVPRVFGFKLHKP 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi2g03632 283 SMART CK_II_beta_2 96 279 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 MobiDBLite consensus disorder prediction 27 53 - -
Vivi2g03632 283 PRINTS Casein kinase II regulatory subunit family signature 215 236 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 PRINTS Casein kinase II regulatory subunit family signature 168 189 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 PRINTS Casein kinase II regulatory subunit family signature 193 214 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 PRINTS Casein kinase II regulatory subunit family signature 243 260 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 PRINTS Casein kinase II regulatory subunit family signature 96 112 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 PRINTS Casein kinase II regulatory subunit family signature 113 127 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 FunFam Casein kinase II subunit beta 194 268 - -
Vivi2g03632 283 SUPERFAMILY Casein kinase II beta subunit 94 282 IPR035991 GO:0005956|GO:0019887
Vivi2g03632 283 MobiDBLite consensus disorder prediction 12 26 - -
Vivi2g03632 283 MobiDBLite consensus disorder prediction 1 92 - -
Vivi2g03632 283 Pfam Casein kinase II regulatory subunit 96 279 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 PANTHER CASEIN KINASE II SUBUNIT BETA 75 282 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 ProSitePatterns Casein kinase II regulatory subunit signature. 197 228 IPR000704 GO:0005956|GO:0019887
Vivi2g03632 283 Gene3D - 194 268 - -
Vivi2g03632 283 FunFam Casein kinase II subunit beta 89 193 - -
Vivi2g03632 283 Gene3D protein kinase ck2 holoenzyme, chain C, domain 1 89 193 IPR016149 GO:0005956|GO:0019887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi2g03632 Vivi-Chr2 145585711 145589257 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi2g03632 K03115 - gmx:100799304 504.597
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi2g03632 2 145585711 145589257 Vivi2g03632 2 145585711 145589257 ECH
Vivi2g03632 2 145585711 145589257 Vivi1g02601 1 54713125 54716191 PCT
Vivi1g02600 1 54713124 54716191 Vivi2g03632 2 145585711 145589257 PCT