Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi1g01592 ATGCATATGATTACTGCTTGGATCACTGATCTATTCGCTTGCATGGGTGGTTGTTTTGGATGCTGTGTGAAACCCACACCTATTATTGCTGTCGATGAGCCTGCCAAAGGACTAAGAATTCAGGGACAGAGTATGAGAAAACCAACCACTTCGGATGGATTTTGGAGTTCGAGCCCTTGTGATCAGGATAACAGCACCATTCAATCTCAACGAAGTATATCTTCTGTCAGTACATTAAATCAAATTCTTCATCAAAGTAATGGAACTTCTACTGCAGGCACCGACCCTGAATTTGTAAACCAAGGTCTTGTTCTTTGGAATGAAAGCAGGCATCAGTGGGTTGGACGCAGCCTATCTGAGAAGCAAAACCAAGAAAAACAAGAATCCCGACTAAATCGGAATGCAACTTATGAAAGTTTGCTTGGAACTAGACAACCTTTCCCGAAATCTGTACCTTTATCTGAAATGGTTGAATTCCTAGTGGATGTTTGGGAGCGTGAAGGAATGTATGGTTGA 516 0.4205 MHMITAWITDLFACMGGCFGCCVKPTPIIAVDEPAKGLRIQGQSMRKPTTSDGFWSSSPCDQDNSTIQSQRSISSVSTLNQILHQSNGTSTAGTDPEFVNQGLVLWNESRHQWVGRSLSEKQNQEKQESRLNRNATYESLLGTRQPFPKSVPLSEMVEFLVDVWEREGMYG 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi1g01592 171 MobiDBLite consensus disorder prediction 43 66 - -
Vivi1g01592 171 Pfam Protein of unknown function (DUF4050) 61 129 IPR025124 -
Vivi1g01592 171 Pfam Protein of unknown function (DUF4050) 134 170 IPR025124 -
Vivi1g01592 171 PANTHER OS07G0479600 PROTEIN 4 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi1g01592 Vivi-Chr1 33627991 33630791 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi1g01592 - - psat:127129871 302.367
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01592 1 33627991 33630791 Vivi5g00263 5 3292291 3295746 ECH
Vivi1g01592 1 33627991 33630791 Vivi4g05092 4 181919629 181920847 ECH
Vivi1g01592 1 33627991 33630791 Vivi1g01592 1 33627991 33630791 ECH