Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi5g00263 ATGGACAACAGTGCTGTTCAATCTCAAGGAAGTATATCTTCAACCAGTCTAACTAACCAAGCTGTGGTTCCTCATGGCAGTTCTTCCAACAACCCGCCTGAGTTTGTAAATCATGGTCTAATTCTATGGAATCAGACTCGACAGCGTTGGGTTGGAAATAAAAAGTCCGAGAATCGAACACAACAATTGCGAGAACCTAAATTGAGTTGGAATGCAACATATGAAAGTTTACTGACAAGCAACAAGCCATTCCGTCAGCCTATCCCCCTTGCTGAAATGGTAGATTTCCTTGTGGACGTTTGGGAACAGGATGGCCTGTATGACTGA 327 0.4343 MDNSAVQSQGSISSTSLTNQAVVPHGSSSNNPPEFVNHGLILWNQTRQRWVGNKKSENRTQQLREPKLSWNATYESLLTSNKPFRQPIPLAEMVDFLVDVWEQDGLYD 108
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi5g00263 108 Pfam Protein of unknown function (DUF4050) 67 108 IPR025124 -
Vivi5g00263 108 Pfam Protein of unknown function (DUF4050) 6 66 IPR025124 -
Vivi5g00263 108 PANTHER OS07G0479600 PROTEIN 1 108 - -
Vivi5g00263 108 MobiDBLite consensus disorder prediction 1 36 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi5g00263 Vivi-Chr5 3292291 3295746 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi5g00263 - - mtr:11429345 203.371
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi1g01592 1 33627991 33630791 Vivi5g00263 5 3292291 3295746 ECH
Vivi5g00263 5 3292291 3295746 Vivi5g00263 5 3292291 3295746 ECH