Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi4g05092 ATGTATTCTAGGTGTTGCTTGTTATCACTTTTTGATAGATTCTCTATAAATTTTGTTCAATTTTGTTGTTCAATTTTTCAATTTTTCAATCTTTGTTGTTCAATTTTTCTCTATTGTTTTTCGTGTTTTCGCATTCTTCTTGTTATTTCCATGGAAAAATTCAAGCTGAAATTCAAAGAAATTTTCTCTAGCATAGGTTGTCTTCGAAGCCGCGAAAAACCTTCTGTTGTTATTACAATGGATGAGAGATTTGAAGGAGAAAGAATTCAAAGACAAACAGTGATTAAGAATGATGGATCATCAGATTTCTGGAGTAGCAGTGCGTATGAAAAGGATCATAGCGCGGCTCGATCGATGAGAAGTGTTTCGTCGAGTGGAATAACAATGAATTCTTCTTCTGATCTTCAAAGTAGTTCAAGCAGTCAAATTAATTCTCATGAATTTGTCAATCAAGGACTTATTGTATGGAACCAGATAAGGCAACAATGGAGTGGAAATAAAATGTCTGAAAGTAAGATAGAAGATAGAGAATCAAAAATAAGTTCAAATGCTACCTATGAAGATCTACTTGGAAACAACAAGGCTTTTCCCCAACCCATTCCTCTAAGAGAAATGATTAACTTTCTTGTTGATATT 636 0.3318 MYSRCCLLSLFDRFSINFVQFCCSIFQFFNLCCSIFLYCFSCFRILLVISMEKFKLKFKEIFSSIGCLRSREKPSVVITMDERFEGERIQRQTVIKNDGSSDFWSSSAYEKDHSAARSMRSVSSSGITMNSSSDLQSSSSSQINSHEFVNQGLIVWNQIRQQWSGNKMSESKIEDRESKISSNATYEDLLGNNKAFPQPIPLREMINFLVDI 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi4g05092 212 Pfam Protein of unknown function (DUF4050) 112 178 IPR025124 -
Vivi4g05092 212 Pfam Protein of unknown function (DUF4050) 180 211 IPR025124 -
Vivi4g05092 212 PANTHER OS07G0479600 PROTEIN 57 212 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi4g05092 Vivi-Chr4 181919629 181920847 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi4g05092 - - vvo:131598461 405.601
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi4g05092 4 181919629 181920847 Vivi4g05092 4 181919629 181920847 ECH
Vivi1g01592 1 33627991 33630791 Vivi4g05092 4 181919629 181920847 ECH