Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g02779 ATGGACAAGACTAAGTTGAGACAACAAGCACTCTTCATACGAACTTCACTCTTTGATGAGGGATTCCTTGACGAGCAATTCATTCAGTTAGAAGAACTGCAAGACGATGTTAATCCCAATTTTGTTGAAGAAATTGTGACCCTTTTCTACAGTGACTCAGTAAGACTGATATACAACATAGAAAGAGGACTGATGAGTAATCCTCCAAATTTCACCAAGCTAGATGATTACATGCATCAGTTCAAGGGTAGTTGCTCAAGCATTGGAGCAAAGAAGGTGAAGACCGAATGTGGCAGATTCAGCGAATACTGCGCAGCAGAAAACTTTGAGGGATGCTTCAGGACTTTCCAACAGATTAATGTAGAGTATACGACTTTGAAGAAGAAGCTCCAGACTTACTTTCAGTTGATGAAGGAAAGCTGCTCAGATTAA 432 0.4028 MDKTKLRQQALFIRTSLFDEGFLDEQFIQLEELQDDVNPNFVEEIVTLFYSDSVRLIYNIERGLMSNPPNFTKLDDYMHQFKGSCSSIGAKKVKTECGRFSEYCAAENFEGCFRTFQQINVEYTTLKKKLQTYFQLMKESCSD 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g02779 143 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Viun9g02779 143 FunFam Histidine-containing phosphotransfer protein 1 1 143 - -
Viun9g02779 143 Gene3D HPT domain 1 142 IPR036641 GO:0000160
Viun9g02779 143 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 8 137 IPR045871 GO:0000160|GO:0009927|GO:0043424
Viun9g02779 143 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 13 139 IPR036641 GO:0000160
Viun9g02779 143 Pfam Hpt domain 44 105 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g02779 Viun-Chr9 36491325 36495315 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g02779 K14490 - gmx:100780856 263.077
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun9g02779 9 36491325 36495315 Viun9g02779 9 36491325 36495315 ECH
Viun10g02616 10 39744126 39745696 Viun9g02779 9 36491325 36495315 ECH
Viun5g03856 5 47004055 47005680 Viun9g02779 9 36491325 36495315 ECH