Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun10g02616 ATGGACAGAAACCAATCCCGCAGACAGGTTGCTGCAATGAAACAGTCCCTCTTTGATCAGGGGTTACTGGATGAACAGTTTATCCAACTGGAGGAATTGCAGGATGATGCAAATCCCAACTTTGTTGAGGAAATTGTCACTCTTCACTATCGTGATTCGTCACGGCTAATCTCAAGCATAGAGCAGGCTCTCAAAGAGAAAAACCCTCTGGATTTCAACAAGCTGGACACTCTTATGCATCAGTTCAAAGGAAGTAGCTCAAGCATAGGAGCCAAAAAGGTGAAAGCAGAGTGCAATCTGTTCAGAGAATATTGCAGAGTAGGAAATGCAGAAGGATGCATGAGGAGCTTTCAACAATTGAAGAAAGAATATGCTACACTTAGAAAGAAACTTGAAGCTTATTTTCAGTTGGCAAGGCAAGCTGGGCCTCAGGAAATAGCATGTCGCTCCAAATAA 456 0.4298 MDRNQSRRQVAAMKQSLFDQGLLDEQFIQLEELQDDANPNFVEEIVTLHYRDSSRLISSIEQALKEKNPLDFNKLDTLMHQFKGSSSSIGAKKVKAECNLFREYCRVGNAEGCMRSFQQLKKEYATLRKKLEAYFQLARQAGPQEIACRSK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun10g02616 151 Pfam Hpt domain 50 128 IPR008207 GO:0000160
Viun10g02616 151 Coils Coil 117 137 - -
Viun10g02616 151 Gene3D HPT domain 1 145 IPR036641 GO:0000160
Viun10g02616 151 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 5 144 IPR045871 GO:0000160|GO:0009927|GO:0043424
Viun10g02616 151 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 6 140 IPR036641 GO:0000160
Viun10g02616 151 FunFam Histidine-containing phosphotransfer protein 4 1 146 - -
Viun10g02616 151 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 134 IPR008207 GO:0000160
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun10g02616 Viun-Chr10 39744126 39745696 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun10g02616 K14490 - gmx:100798055 291.582
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02616 10 39744126 39745696 Viun5g03856 5 47004055 47005680 ECH
Viun10g02616 10 39744126 39745696 Viun10g02616 10 39744126 39745696 ECH
Viun10g02616 10 39744126 39745696 Viun9g02779 9 36491325 36495315 ECH
Viun5g03856 5 47004055 47005680 Viun10g02616 10 39744126 39745696 PCT