Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03856 ATGGACAAAATCCATTCCCTCAGGCAAGTAGCTGCTATCAAACACTCCCTCTTCGATCAGGGATATTTGGATGAGCAATTTATCCAACTGGAAGAATTGCAGGATGATGCTAATCCTAACTTTGTTGAGGAAATTGTTACTCTTTACTATCGTGATTCCTCTAGGCTTATCACAAACTTGGATCAAACACTGGAAAGGAACCCTCTGGATTTCAACAAACTGGACACAATTATGCACCAGTTTAAAGGAAGCAGTTCAAGCATTGGAGCAAAAAAGGTGAAAGCAGAATGCACTCTGTTTAGGGAATATTGCAGGGCAAGAAATGGAGAAGGATGCAGGAGGAGCTTCCAACAAATGAAGAAAGAATATGCAACACTGAGAAAAAAGCTTGAAACATATTTTCAGATGGCAAGGCAAGCTGGGCCCAAAGAGACAGCATTTCGGCCCAAGTAA 453 0.415 MDKIHSLRQVAAIKHSLFDQGYLDEQFIQLEELQDDANPNFVEEIVTLYYRDSSRLITNLDQTLERNPLDFNKLDTIMHQFKGSSSSIGAKKVKAECTLFREYCRARNGEGCRRSFQQMKKEYATLRKKLETYFQMARQAGPKETAFRPK 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03856 150 Pfam Hpt domain 44 127 IPR008207 GO:0000160
Viun5g03856 150 ProSiteProfiles Histidine-containing phosphotransfer (HPt) domain profile. 38 133 IPR008207 GO:0000160
Viun5g03856 150 SUPERFAMILY Histidine-containing phosphotransfer domain, HPT domain 7 139 IPR036641 GO:0000160
Viun5g03856 150 FunFam Histidine-containing phosphotransfer protein 4 1 145 - -
Viun5g03856 150 Gene3D HPT domain 5 145 IPR036641 GO:0000160
Viun5g03856 150 PANTHER PHOSPHORELAY INTERMEDIATE PROTEIN YPD1 8 143 IPR045871 GO:0000160|GO:0009927|GO:0043424
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03856 Viun-Chr5 47004055 47005680 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03856 K14490 - gmx:100800310 281.952
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun10g02616 10 39744126 39745696 Viun5g03856 5 47004055 47005680 ECH
Viun5g03856 5 47004055 47005680 Viun5g03856 5 47004055 47005680 ECH
Viun5g03856 5 47004055 47005680 Viun9g02779 9 36491325 36495315 ECH
Viun5g03856 5 47004055 47005680 Viun10g02616 10 39744126 39745696 PCT