Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g02879 ATGGCAACACATGACATGGATCCCGATGTTGTTCGCTGGGGTCTTCATCTTCTAGATGTTTGCACGCTTTCCCATCATGGTTCGCCTAGTATCCTTACCCACTATGATCCTGATTTTAGTCGAGTTGAATATGTCAGAGAAGGATACTGTCAGCATGAGTATGTGGAGAATGACGAGGCTGTTGCACGAGCTTATCAAGAAGAATTATCACAACTTGACTCCATGGGAGCTTCTGGGACACCCAGTTATCAGAATGAGGGAATGCAAGGAACTGTCTATACACAAGATTGGCCTCATTCTTCAAATGGAAACTATAATTATGGAAACGAGTCTTGTCAGAACTCTGTAGATGAGTCCCCGTACAATATGAAAGATGTGGAGAATTATGGTCCAAGTGAAAGGGGAAATGATATGCATGACATTGATGTTTTTGGTTCCTCTAGGTCAGGAGAGGTACCTGTTATTAGAGATGATGTCTGGGATTCTTTGGAAATATCAGACGAATCTTCTCTTGATGGCGAAGTTGGCAAAAGATTATACCAGATGGTTCCCATCCCCCATATTCCTAAAACCAATGAAAAAATACCATCTGATGACGAAGAGACATCAGATCATCAAAGGCTTCTAGACAGATTGCAGTTATATGATCTGATTGAGAATAAGGTTCAAGGAGATGGTAACTGCCAGTTCCGTTCTTTGTCAGACCAGCTCTATCGATCTCCAGACCACCACCAATTTGTGCGGGAGCAGATTATTCAACAGCTCAAATCTTCCCCAGATCTGTATTCTGGTTATGTTCCCATGGGTTATAGTGATTATTTGAAGAAGATGAGCAAGAGTGGTGAATGGGGTGATCATGTCACATTGCAGGCGGCTGCAGATTGGTATGGTGTCAAAATTCTTGTTATTACATCTTTTAAGGACACGTGTTACATAGAGATTCTTCCACAGATACAGAAGTCTGGAAGAGTGATATTTCTGAGCTTTTGGGCAGAGGTGCATTACAACTCAATCTATCCAGAAGGAGAATTGCCCTCATTTCAGACAAGGAAAAAGAAGAAATGGTGGAATTTTGGTGCATAG 1083 0.4183 MATHDMDPDVVRWGLHLLDVCTLSHHGSPSILTHYDPDFSRVEYVREGYCQHEYVENDEAVARAYQEELSQLDSMGASGTPSYQNEGMQGTVYTQDWPHSSNGNYNYGNESCQNSVDESPYNMKDVENYGPSERGNDMHDIDVFGSSRSGEVPVIRDDVWDSLEISDESSLDGEVGKRLYQMVPIPHIPKTNEKIPSDDEETSDHQRLLDRLQLYDLIENKVQGDGNCQFRSLSDQLYRSPDHHQFVREQIIQQLKSSPDLYSGYVPMGYSDYLKKMSKSGEWGDHVTLQAAADWYGVKILVITSFKDTCYIEILPQIQKSGRVIFLSFWAEVHYNSIYPEGELPSFQTRKKKKWWNFGA 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g02879 360 SUPERFAMILY Cysteine proteinases 201 340 IPR038765 -
Viun7g02879 360 CDD OTU_plant_OTU9-like 208 339 - -
Viun7g02879 360 FunFam OTU domain-containing protein 199 345 - -
Viun7g02879 360 PANTHER OTU DOMAIN CONTAINING PROTEIN 55 342 - -
Viun7g02879 360 Gene3D - 197 344 - -
Viun7g02879 360 Pfam OTU-like cysteine protease 223 309 IPR003323 -
Viun7g02879 360 ProSiteProfiles OTU domain profile. 217 341 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g02879 Viun-Chr7 32071000 32077385 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g02879 - - gmx:100820379 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02382 1 34297398 34302413 Viun7g02879 7 32071000 32077385 ECH
Viun7g00970 7 9784985 9790141 Viun7g02879 7 32071000 32077385 ECH
Viun7g02879 7 32071000 32077385 Viun7g02879 7 32071000 32077385 ECH