Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00970 ATGGGGTTGTATGAGAATTCAGATGTTATGCAGTGGGGTTTTAATCTTTTTGGCTCTGACCCTGCTTATAGCCCTGGATACTATTGTGACATAATTCAACCTAATACTGGTGATGTCTATAATAATGGGCACTACTTCCATAGCCACTATACTACTCAACATAACCAAATAGAGAATGACGAGATCATTGCACGAGCTCTACAAGAACAATTTTCACGAGTAGATATTGATGATTGTTCAAGATATTCACAGACACATGAAGAGCAGTTCCATGCTTCTGAGCCAGCATATGATTGGCGTAACTCGTCGATGATGTATTGTTCAGGAGGTCATGATTATACCTACGATGGAATTGGGGACATAAAACCTTCTAGTTCATTATGTTGTAGGCCTTGTGAAGCAGAGGAAAGCTCATTAGAGCTAACTGACAATTATTCACTTGACGATGAAATAGGGAGGAAATTGAGTCAGATGGTTCCAATTCCTCATGTCCCAAAAATTAATGGAGAAATTCCTTCAATTGATGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGTGGAGCATACGGTGCAAGGTGATGGTAATTGTCAGTTCCGTGCATTATCTGATCAGTTGTTTAACACACCTGATCACCACAACACTGTGAGACAAGAAGTTGTGAACCAGCTACGGTCTCATCCAGAGATTTATGAGGGATATGTTCCCATGGAATATGGCGAATATTTGGAGAAAATGTCTAAGAGTGGTGAATGGGGGGATCATGTAACTCTTCAAGCAGCCGCAGATTCGTATGGTGTTAGAATATTTGTGGTGACTTCATTCAAGGACACCTGTTGCATAGAGATTCTTCCTAATTTTGAGAATCCAAGAGGAGTGATTTTTCTTAGTTTTTGGGCAGAGGTGCATTACAACTCCATCAATCCTCAAGGAGATTCTTTCAAGAAAAACAACCCTATTGACTCAAATATACCTTCAAGTGAATCAAAAAAGAAGAAAAGATGGTGGAACTTTGGGACCAAACATTAA 1050 0.3943 MGLYENSDVMQWGFNLFGSDPAYSPGYYCDIIQPNTGDVYNNGHYFHSHYTTQHNQIENDEIIARALQEQFSRVDIDDCSRYSQTHEEQFHASEPAYDWRNSSMMYCSGGHDYTYDGIGDIKPSSSLCCRPCEAEESSLELTDNYSLDDEIGRKLSQMVPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFVEHTVQGDGNCQFRALSDQLFNTPDHHNTVRQEVVNQLRSHPEIYEGYVPMEYGEYLEKMSKSGEWGDHVTLQAAADSYGVRIFVVTSFKDTCCIEILPNFENPRGVIFLSFWAEVHYNSINPQGDSFKKNNPIDSNIPSSESKKKKRWWNFGTKH 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00970 349 MobiDBLite consensus disorder prediction 322 349 - -
Viun7g00970 349 PANTHER OTU DOMAIN CONTAINING PROTEIN 53 319 - -
Viun7g00970 349 FunFam OTU domain-containing protein 175 321 - -
Viun7g00970 349 CDD OTU_plant_OTU9-like 184 314 - -
Viun7g00970 349 ProSiteProfiles OTU domain profile. 193 317 IPR003323 -
Viun7g00970 349 Pfam OTU-like cysteine protease 199 285 IPR003323 -
Viun7g00970 349 Gene3D - 174 322 - -
Viun7g00970 349 SUPERFAMILY Cysteine proteinases 179 317 IPR038765 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00970 Viun-Chr7 9784985 9790141 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00970 - - gmx:100811851 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00970 7 9784985 9790141 Viun1g02382 1 34297398 34302413 ECH
Viun7g00970 7 9784985 9790141 Viun7g02879 7 32071000 32077385 ECH
Viun7g00970 7 9784985 9790141 Viun7g00970 7 9784985 9790141 ECH
Viun1g02382 1 34297398 34302413 Viun7g00970 7 9784985 9790141 PCT