Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02382 ATGGTTTTGTATGAGCATTCAGATGTTTTTCAGTGGGGTCTTAATCTTCTTGATGGTGACCCTGCTTATGGTCCTGGATACTATGGCAACATAATTCAACATGATTCTGGAGACATCTATAATGGACACTACTTCCATAGCCATTATGATAATGAATGTAACCATGTAGAGAATGATGAGATCATTGCCCGTACACTTCAAGAAGAGTTTTCACAGCTAGAGATTGCTGAATCTTCTGGATATTTTCAGCAAGGTGAACAACAGTTCCATGTTCCTGAGACTCAGCCTGCATATGATTGGCATAACTCTTCAATGATGAACTACTGTTCGGGAGATCATGATTATGCTCAAGAAGGAGTTGGTGATGGAGAACCCTCTAGTTCATGTTCTAGTCCTTGTGAAACAGAGGAATATTCATTGGAGCTAACTGACAATTATCCACTTGATGATGAAGTTGGGAGGAGATTGAGTCAAATGATACCGATTCCCCATGTTCCAAAAATTAATGGTGAAATTCCTTCAATTGACGAAGCAACTTCAGATCATCAAAGGCTTCTGGATAGATTGCAGTTATATGACTTTGCGGAGAACAAAGTACAAGGCGACGGTAATTGTCAGTTCCGAGCACTGTCTGATCAATTGTATCACGCACCTGATCACCACAAGTTTGTGAGACGACAAGTTGTCAATCAGCTTAAATCTAATCCAGAGATTTATGATGGATATGTTCCCATGGAGTACGATGATTATTTGGACAAGATGTCTAAGAGTGGCGAATGGGGTGATCATGTTACTCTTCAAGCAGCTGCAGATTCGTATGGTGTAAGAATATTTGTGATGACTTCTTTCAAGGACACCTGTTGCATAGAGATACTTCCTCATTTTGAGAACCCAAAAGGAGTGATTTTCCTGAGTTTCTGGGCAGAGGTGCACTACAACTCCATTTATCCCCAAGGAGATATACCATCAAATGAATCTAGAAAGAAGAAAAGGTGGTGGAGCTTTGGCAGCAAGCATTAG 1020 0.4049 MVLYEHSDVFQWGLNLLDGDPAYGPGYYGNIIQHDSGDIYNGHYFHSHYDNECNHVENDEIIARTLQEEFSQLEIAESSGYFQQGEQQFHVPETQPAYDWHNSSMMNYCSGDHDYAQEGVGDGEPSSSCSSPCETEEYSLELTDNYPLDDEVGRRLSQMIPIPHVPKINGEIPSIDEATSDHQRLLDRLQLYDFAENKVQGDGNCQFRALSDQLYHAPDHHKFVRRQVVNQLKSNPEIYDGYVPMEYDDYLDKMSKSGEWGDHVTLQAAADSYGVRIFVMTSFKDTCCIEILPHFENPKGVIFLSFWAEVHYNSIYPQGDIPSNESRKKKRWWSFGSKH 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02382 339 PANTHER OTU DOMAIN CONTAINING PROTEIN 54 319 - -
Viun1g02382 339 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Viun1g02382 339 CDD OTU_plant_OTU9-like 185 316 - -
Viun1g02382 339 SUPERFAMILY Cysteine proteinases 180 318 IPR038765 -
Viun1g02382 339 Gene3D - 175 322 - -
Viun1g02382 339 FunFam OTU domain-containing protein 176 322 - -
Viun1g02382 339 Pfam OTU-like cysteine protease 200 286 IPR003323 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02382 Viun-Chr1 34297398 34302413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02382 - - aip:107648617 597.816
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02382 1 34297398 34302413 Viun7g02879 7 32071000 32077385 ECH
Viun1g02382 1 34297398 34302413 Viun1g02382 1 34297398 34302413 ECH
Viun7g00970 7 9784985 9790141 Viun1g02382 1 34297398 34302413 ECH
Viun1g02382 1 34297398 34302413 Viun7g00970 7 9784985 9790141 PCT