Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01589 ATGGAATCAACGCATGTAATATCCATTACTGACAATGTTGCTCCAAGGAAGAATACTACTAAAACGTTTAAATTTTCACTTCCACCGGTTTTTTCCCGTCTTAGAGAAAACAAAATCCATCTCTGGGATAAGCAAATGAAAGACGCTAAAAAAATTATCCACAGCATCAAAGTTGGAATCTCCCTTGTTTTGATTTCACTTCTGTACCTCTTGGATCCTCTTTACGAGCAAGTAGGAGAAAATGCTATATGGGCTATCATGACTGTGGTCGTCACCTTCGAATTTTCTGCAGGAGCTACTCTAGGCAAAGGCTTAAATCGCGGAATAGGAACTATATTAGGAGGTGGACTGGGTTGCATGGCAGCAGTTTTGGCTCAAAATATTGGTGGAGTTGGCAACTCGATTATAATTGGTGCTTCTGTATTTATATTTGGGACAATTGCAACATATTTTCGACTATTCCCCAGCGTGAAGAAGAGATACGATTACGGAGTGATGATTTTTATTCTGACTTTTAGTTTGATTGTGGTGTCTGGTGTGCGCACCGAAGATCAGAAAGTTTGGGAAATAGCAGTTGAACGGCTTTTAACAATCGTGATGGGTTTCGTTGTGTGCATTTGTGTGAGCTTCTTGATCTTCCCCTTGTGGGCCAGTGATGAACTTCATGATTCCATTGTCTCTAGATTCCAACACATTGCCAATTCATTACAAGGGTGCATGGAGGAATATGTCAAATTCGTTAGTGAAAAAGAAAATAAAAAGCCTGGTGCTAGCTTCAGTGTTTGCAAGTCGTTGTTGGACTCCAAATCAAAGGACGAGGTGCTGGCAAATTTTGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTTTTCTATCCTTGGGAGAAGTACCTAAAGATTGGAGACGTTCTTCGAGAATTAGCTGCAATAACTCTTGCTTTGGGAGGGTGCTTCCAAGCCTCAGAAACGGCCATGAAAATGGAAGCAGTGAGTGAAAGTGTTGAAAGGGAAGCATGTGAGGCAATTGGGTCAGGAATTGTGTGGAGTCTGCAAGAACTTGGGGAGAGCATGAAGCAAATGAGGAAGTGTGAGGCTGACATATCAGAAATGTTGAAGACAGTGAGAGAAGAGATAAGCTTGGTGATTTCTACGTCGAAAATGGCAGCAATTGATAACATGGATGCAGTTGCAGTGGCGAGCTTCGTGTTCTTACTGAAGAAAGTGGTGGAGAAAGTAGAAGAACTTACCAAAGAGGTGGAGCAACTAGGAGACCTTGCTGCTTTTCCTGCTCATTCAACTCTAGTCTAG 1308 0.4197 MESTHVISITDNVAPRKNTTKTFKFSLPPVFSRLRENKIHLWDKQMKDAKKIIHSIKVGISLVLISLLYLLDPLYEQVGENAIWAIMTVVVTFEFSAGATLGKGLNRGIGTILGGGLGCMAAVLAQNIGGVGNSIIIGASVFIFGTIATYFRLFPSVKKRYDYGVMIFILTFSLIVVSGVRTEDQKVWEIAVERLLTIVMGFVVCICVSFLIFPLWASDELHDSIVSRFQHIANSLQGCMEEYVKFVSEKENKKPGASFSVCKSLLDSKSKDEVLANFAKWEPWHGKFGFFYPWEKYLKIGDVLRELAAITLALGGCFQASETAMKMEAVSESVEREACEAIGSGIVWSLQELGESMKQMRKCEADISEMLKTVREEISLVISTSKMAAIDNMDAVAVASFVFLLKKVVEKVEELTKEVEQLGDLAAFPAHSTLV 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01589 435 Pfam Aluminium activated malate transporter 46 379 IPR020966 GO:0015743
Viun7g01589 435 Coils Coil 405 425 - -
Viun7g01589 435 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 40 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01589 Viun-Chr7 20571905 20574790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g01589 7 392 Miscellaneous Gene Families AT5G46600 37.406 4.25e-90 281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01589 K25841 - gmx:100527892 622.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01589 7 20571905 20574790 Viun7g01589 7 20571905 20574790 ECH
Viun1g01973 1 31049820 31052027 Viun7g01589 7 20571905 20574790 PCT
Viun1g02599 1 36068166 36070617 Viun7g01589 7 20571905 20574790 PCT