Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g01973 ATGGAATCGAGTCATGTAATAGCCATTACAAATAGAGAAGAAGATAATTTAGCAGACACAACCAAGGAGAAGAAAACATTCGAATTTTCCCATGTTGGGAAAAAGGAAGTCCACTGTGTTTCCATTAGTTTCAGTCCCAGAGAGAAGAAGCAGATGCAGAGAGACCAAGACACGAGGAAGATGATTCACTGCATCAAAGTGGGAATCTCCTTGGTTTTGGTTTCACTCCTGTACCTCTTGAACCCTCTCTTTAAGCAACTTGGAGAAAATGCAATGTGGGCTATCATGACAGTTGTTGTCATGTTTGAATTCTCTGCAGGGGCCACACTAGGAAAGGGTTTCAACCGTGGACTAGGAACTATTATAGGAGGAGGACTAGGTTGCTTGGCAGCACTTTTTGCACAAAGCATTGGGATTGGCAGGGTTGGAAACTCGATCATAATCGCTGCTTCTGTATTTATATTTGGATCATTTGCCACATATCTTCGACTGATTCCAAGCATAAAGAAAAGATACGATTATGGAGTGATGATATTCTTGCTGACTTTCAATCTAGTTGTGGTTTCTGGCACACGCGTGAATGGGAAAGTGTGGGAATTAGCCCGCGAACGTCTCTTGAATATACTGATGGGCTTCATTGTGTGCCTCTGTGTGAGCTTGTTCGTCTTTCCTTTGTGGGCCAGTGATGAACTTCACCATTCCATCGTCTCCAGATTCCTTGACCTTGCCAATACAATTCAAGGTTGTTTGGGCGAATGTACCAAGATCATTAACGAAAAGGAAAATCAACCCTGTGCTAGCTTCAACGTTTGCAAGTCAGTGTTGAACTCCAAGTCAAAGGATGAAACATTGGCAAATTTCGCAAAATGGGAACCCTGGCATGGAAAATTTGGATTCTCCTACCCTTGGGAGAGGTACTTAAAGATTGGAGAGATTCTTCGCGAACTGGCTGCATTTATTCTTGCAATGCGTCGTTGCCTTGAAGCATCAAAAGAGCCCATGGCCACTTTGAGAGAATCACAATGGGTCCATTTAGAAACATGCGAAGCACTTGAGTCAAAGGTTGCGTGCATTCTGAAAGAACTAGGCGACAGCATGAAGCAAATGATGAAATGTAATGCAAAGGGTTGTGTTTCGGAGCAGTTGAAAACCGTTAGAGAAGATTTAAGCTTCATAATTTCCACGTCCAAAATAGCACAACTTGAGGACGATCAAGTGCTAGCCATTGCTAGCTTCGTCTTCTTGCACAAGGAAATGATAGGGAAGGTTGAGGAATTGGTGAAAGAGATGGAAGAACTTGGAAAAATCGCAGGTTTTCGCACCCCAATAACTGCATTGTCTTCGTAG 1347 0.4298 MESSHVIAITNREEDNLADTTKEKKTFEFSHVGKKEVHCVSISFSPREKKQMQRDQDTRKMIHCIKVGISLVLVSLLYLLNPLFKQLGENAMWAIMTVVVMFEFSAGATLGKGFNRGLGTIIGGGLGCLAALFAQSIGIGRVGNSIIIAASVFIFGSFATYLRLIPSIKKRYDYGVMIFLLTFNLVVVSGTRVNGKVWELARERLLNILMGFIVCLCVSLFVFPLWASDELHHSIVSRFLDLANTIQGCLGECTKIINEKENQPCASFNVCKSVLNSKSKDETLANFAKWEPWHGKFGFSYPWERYLKIGEILRELAAFILAMRRCLEASKEPMATLRESQWVHLETCEALESKVACILKELGDSMKQMMKCNAKGCVSEQLKTVREDLSFIISTSKIAQLEDDQVLAIASFVFLHKEMIGKVEELVKEMEELGKIAGFRTPITALSS 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g01973 448 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 47 442 - -
Viun1g01973 448 Pfam Aluminium activated malate transporter 56 401 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g01973 Viun-Chr1 31049820 31052027 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g01973 46 395 Miscellaneous Gene Families AT5G46600 40.274 4.59e-87 274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g01973 K25841 - gmx:100802201 661.373
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g01973 1 31049820 31052027 Viun1g01973 1 31049820 31052027 ECH
Viun1g01973 1 31049820 31052027 Viun7g01589 7 20571905 20574790 PCT