Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02599 ATGGATATTGAGTCAACAATGGAAGCAAACAAGGGAGGGGTTTTTGTTGATTGGAGGAACAGCATCAAAGCTTTGCCTAGGAACATGAAGTCCATGGTTATCAACTTCACAAGGAGCATAACAAAGATTGGAAAAGATGATCCCAGACGAGTTTATCACTCATTAAAAGTTGCATTTGCTCTTACCTTGGTTTCCTTGTTTTACTACTCCAGGCCTCTCTATGATGGCTTCGGAGTCGCTGGAATGTGGGCTGTTCTGACAGTGGTGGTTGTATTTGAATTCAGCGTAGGTGCAACCCTCAGCAAAGGTTTAAATAGAGGATGTGCTACATTGCTAGCTGGTGCTTTAGGAGTTGGAGGGCAACACTTAGCGACTGCTTTTGGAGAAAGAGAAAAACCTATTGTCCTTGGCATCCTAGTCTTCATTCTAGCTGCGGGAGCTACTTTTTTCAGATTTTTTCCAAAGATCAAGGCAAGATACGACTATGGGGTGGTGATATTTATATTGACCTTCTGTTTAGTTGCTGTCTCTGGGTATCGAGTGGATGAACTCTTCGAGCTTGCTCATCAGAGACTTTCAACCATTTTAATAGGAGCAACAGCTTGCATGGTTATCTCCATTTTCATTTGTCCAGTATGGGCAGGTGAAGACCTTCACAAGTTGGTAGCTTCAAACATACAAAAGTTGGCAAATTACTTAGAGGGATTTGAAGTCGAATATTTTCATTGCTCAGAGGATAAAGAAAAATGTGAGAAGTCAGTTCTTGAAGGATACAAAAGTGTTCTCAATTCCAAAGCAAGTGAGGAGTCCTTGGCAAATTTGGCAAGGTGGGAACCGGGACATGGCCGTTTTCGTCTTCGACATCCTTGGAAGCAGTACTTGAAGATTGGTGCACTTACTCGGGGATGTGCTTATAAGATTGAAACCCTTAACAACTACCTTAACCCAGAAATCAATACATCTGTGGAATTCAAGTGTAAAATTCAAGAACCATGCACAAAGATGATTTCAGAGTCGAGCAAGGCGTTAAACGTAATATCTTCATCAATCAAAACAATGACACATCCATCAGCTGCCAAAAGCCACATCGAAAACGCAAAAACTGCAGTTGAAGAGCTCAAATTTGCCCTTGAAACTGTTTCTTTGGAAGACGCTGAACTCCTAGCCATAATCCCAGTTATCACAGTAGCTTCAATACTCGAAGAAATCACCAAGTCAGTGGAGAAAATCCACGAGTCTGTTTCCGAGCTTTCTCAGTTAGCCTATTTCAAGAGTGTTGCAGAACCCAATGTCTCGCCAGAGAAGCCACACCGTCTTCATCGAGGTATCATAAAACCTGTTGTGGATATTGAAAACACTGTCGACCACGTTGAAATTACGATCCCAGAGATAACCACAGACTCGCCAGAAAAAGAAAAGACAGCAACAAAACCCTCCGAACATATGTAA 1449 0.4203 MDIESTMEANKGGVFVDWRNSIKALPRNMKSMVINFTRSITKIGKDDPRRVYHSLKVAFALTLVSLFYYSRPLYDGFGVAGMWAVLTVVVVFEFSVGATLSKGLNRGCATLLAGALGVGGQHLATAFGEREKPIVLGILVFILAAGATFFRFFPKIKARYDYGVVIFILTFCLVAVSGYRVDELFELAHQRLSTILIGATACMVISIFICPVWAGEDLHKLVASNIQKLANYLEGFEVEYFHCSEDKEKCEKSVLEGYKSVLNSKASEESLANLARWEPGHGRFRLRHPWKQYLKIGALTRGCAYKIETLNNYLNPEINTSVEFKCKIQEPCTKMISESSKALNVISSSIKTMTHPSAAKSHIENAKTAVEELKFALETVSLEDAELLAIIPVITVASILEEITKSVEKIHESVSELSQLAYFKSVAEPNVSPEKPHRLHRGIIKPVVDIENTVDHVEITIPEITTDSPEKEKTATKPSEHM 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02599 482 Coils Coil 363 383 - -
Viun1g02599 482 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 26 427 - -
Viun1g02599 482 Pfam Aluminium activated malate transporter 42 418 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02599 Viun-Chr1 36068166 36070617 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun1g02599 1 463 Miscellaneous Gene Families AT3G11680 56.356 1.26e-173 495
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02599 K25841 - gmx:100170704 800.431
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02599 1 36068166 36070617 Viun1g02599 1 36068166 36070617 ECH
Viun1g02599 1 36068166 36070617 Viun7g01589 7 20571905 20574790 PCT