Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g00863 ATGGAAGCGTTTGAAGGGATAAGGAGGGGTGACATTTCATCCCAAGTGGGTCTGGTGTGGAGGCAAGTGAAGGAGCCAGTGATGGTGCCACTGCTGAGAGTGGCAGTGTTTTTGTGCTTGGCGATGTCGTTGATGATGTTGGTGGAGAGAGTGTACATGGGCCTGGTGATTTGCTTGGTGAAGGTGTTCGGTAGAAGACCTGAGAAGCGTTACAAATGGGAGGCTCTGAAGGAGGACGTTGAGCTGGGAAACTCTACCTATCCCATGGTTCTGGTTCAAGTCCCAATGTACAACGAAAGAGAGGTTTATCAGCTCTCAATTGGTGCTGCTTGTGGCCTTTCTTGGCCTTCGGACAGGATCATCATACAAATTCTTGATGATTCTACTGACCCATCGATAAAGGAAATGGTGCAAATGGAATGTAGCAGATGGGCGAGTAAAGGAGTGAACATAAAGTACGAAGTTCGGGACAACAGAAATGGGTACAAAGCAGGGGCTCTGAAAGAAGGGATGAAACGTAGCTACGTGAAGCAATGTGACTATGTCGCCATTTTTGACGCAGATTTTCAACCAGAACCTGATTTCCTCTGGCGAACTGTCCCGTTCCTCGTCAACAATCCTGAACTTGGTCTTGTTCAGGCACGCTGGAAGTTTGTGAATGCCAATGAATGTTTGATGACCAGGATGCAAGAGATGTCACTGGATTACCATTTTACTGTGGAACAAGAAGTAGGGTCTTCCACTTACGCATTCTTTGGCTTCAATGGAACTGCGGGTGTGTGGAGAATTTCGGCACTGAATGAGGCTGGGGGATGGAAGGATAGAACCACAGTGGAAGACATGGACCTAGCTGTTCGAGCAAGTCTCAAAGGATGGAAATTCTTATACCTGGCTAATTTGAAGGTGAAAAATGAACTACCAAGTACTCTGAAGGCCTACAGGTACCAACAGCACAGGTGGTCTTGTGGACCAGCCAATCTTTTCCGGAAAATGGTGATGGAGATAATGAGGAACAAGAAAGTATCCTTATGGAAGAAGATATATGTGGTTTACAGCTTCTTCTTCGTCCGGAAGGTCGTGGCCCACATAAACACTTTCATGTTCTATTGCATTGTCTTACCTGCAACAGTTGTGGTGCCTGAGGTGGTGGTACCCAAGTGGGGTGCTGTTTATATCCCTTCCATCATCACACTCCTAAATGCTGTTGGAACTCCAAGGTCACTCCACTTACTGGTATTCTGGATTCTCTTTGAGAACACCATGTCTCTGCATCGAACAAAGGCTACAATTATTGGTCTGCTAGAGGCTAGTCGAGTGAATGAATGGATTGTCACTGAAAAACTTGGAGATGCTCTTAAGGGTAAAGGTGGGGGTAAAGCACCCAAGAAGATTCGATTCAGAATTGGAGACAGAATTCACATGTTGGAACTTCTTGTTGGATTCTACCTTTTCTTCTGTGGCTGCTATGATGTTATGTTCGGGAAAAACCGGTTCTATATATTCCTATACATTCAATCGATTGCTTTCTTCATCATGGCATTTGGATATGTTGGCACTATCGTTCCCAACTCCTAA 1575 0.4546 MEAFEGIRRGDISSQVGLVWRQVKEPVMVPLLRVAVFLCLAMSLMMLVERVYMGLVICLVKVFGRRPEKRYKWEALKEDVELGNSTYPMVLVQVPMYNEREVYQLSIGAACGLSWPSDRIIIQILDDSTDPSIKEMVQMECSRWASKGVNIKYEVRDNRNGYKAGALKEGMKRSYVKQCDYVAIFDADFQPEPDFLWRTVPFLVNNPELGLVQARWKFVNANECLMTRMQEMSLDYHFTVEQEVGSSTYAFFGFNGTAGVWRISALNEAGGWKDRTTVEDMDLAVRASLKGWKFLYLANLKVKNELPSTLKAYRYQQHRWSCGPANLFRKMVMEIMRNKKVSLWKKIYVVYSFFFVRKVVAHINTFMFYCIVLPATVVVPEVVVPKWGAVYIPSIITLLNAVGTPRSLHLLVFWILFENTMSLHRTKATIIGLLEASRVNEWIVTEKLGDALKGKGGGKAPKKIRFRIGDRIHMLELLVGFYLFFCGCYDVMFGKNRFYIFLYIQSIAFFIMAFGYVGTIVPNS 524
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g00863 524 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 79 303 IPR029044 -
Viun7g00863 524 FunFam Glucomannan 4-beta-mannosyltransferase 9 79 307 - -
Viun7g00863 524 Pfam Glycosyl transferase family group 2 181 377 IPR001173 -
Viun7g00863 524 CDD CESA_CaSu_A2 88 324 - -
Viun7g00863 524 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 13 519 - -
Viun7g00863 524 SUPERFAMILY Nucleotide-diphospho-sugar transferases 85 367 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g00863 Viun-Chr7 7822456 7828587 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun7g00863 9 523 Miscellaneous Gene Families AT5G03760 79.070 0.0 888
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g00863 K13680 - gmx:100782772 942.184
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g00863 7 7822456 7828587 Viun11g01798 11 33964316 33970150 ECH
Viun7g00863 7 7822456 7828587 Viun7g00863 7 7822456 7828587 ECH
Viun1g02467 1 35039051 35044357 Viun7g00863 7 7822456 7828587 PCT