Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01798 ATGGTTGATTCGGAGCCCAAGTTCTTCATCCCGGAGTCAATCCAGGGCGTGAATTTCGACGTGACGGCGCAGATGAGGATGGTCTGGGAGGTCATAAAGGCGCCGCTGATCGTGCCGCTGCTGAACATGGCGGTGTACATTTGCCTCGCCATGGCCCTCATGCTCTTCATGGAGAGGGTCTACATGGGCATTGTCATCATCCTCGTCAAACTCTTCTGGAAGAAACCCCATCAACGCTACAAGTTCGAACCCCTCCAAGAAGACGAGGAACTCGGCAACACCAACTTCCCCGTCGTCCTTGTTCAGATTCCCATGTTCAATGAAAAAGAGGTGTACAAGGTGTCAATTGGAGCAGCTTGTAATCTCTCATGGCCCGCGGATCGTCTCGTCATTCAAGTGCTCGACGATTCAACTGACCCTGCCATCAAGCAAATGGTGGAGATGGAATGCCAGAGATGGGCAAGCAAAGGGATAAACATAACGTACCAAATCAGAGAGACTCGTGGTGGATACAAAGCTGGTGCTCTAAAAGAAGGCCTAAAACGTAGCTATGTGAAACATTGCGAGTACGTGGCAATTTTCGATGCTGATTTTCGTCCAGAACCAGATTTTCTCAGACGTTCCATTCCCTTCTTGGTGGGCAACCCCGACATTGCTCTCGTTCAAGCTCGTTGGAGATTTGTGAATGCTGATGAGTGTTTATTGACAAGAATGCAAGAGATGTCTCTGGATTACCATTTCACTGTGGAACAAGAAGTTGGGTCAGCCACTCATGCTTTCTTCGGTTTCAACGGAACTGCTGGAGTTTGGAGAATAGCTGCTATTAATGAAGCTGGAGGGTGGAAAGACAGAACAACAGTGGAAGATATGGATCTTGCTGTTCGTGCTAGTCTTAGGGGATGGAAATTTTTGTACCTCGGAGACCTTCAGGCAAAAAGTGAGCTTCCAAGTACTTTGAGAGCCTTTAGATTTCAGCAGCACAGATGGTCCTGTGGTCCTGCAAATTTGTTCCGCAAAATGGTTATGGAGATAGTAAGGAACAAGAAAGTTAGATTCTGGAAGAAAGTGTACGTTATATACAGCTTCTTCTTTGTTCGCAAAATCATAGCTCACATGGTCACTTTCTTCTTCTACTGTCTTGTGATTCCCCTCACAATCTTGATCCCTGAGGTTCATGTTCCAATATGGGGAGCGGTTTATATTCCTTCTGTCATCACCATTCTGAATTCAGTTGGAACACCAAGGTCCATTCACCTTCTGTTCTATTGGATCCTCTTTGAGAATGTGATGTCTCTGCACCGTACAAAGGCAACATTTATAGGTCTCTTGGAGTATGGAAGAGCAAATGAATGGGTTGTGACTGAAAAACTTGGTGACTCTGTCAACAGCAATAACAAGAATAAACCAGGAGATGCTGCCAAGAAGAATGCTGCCACCAAGGCACCCAAAAAGACTACTCGATCCAAATTTGTTGAAAGACTTAACTTACTGGAGCTTGGATTTGCTGCATTTCTCTTCTTATGTGGGTGCTATGATTTTGTGCATGGGAAGCACAACTACTTCATCTACCTCTTCCTTCAGACCATAACATTCTCAATTGTAGGATTTGGCTATGTTGGCACCATTGTGTAA 1632 0.4547 MVDSEPKFFIPESIQGVNFDVTAQMRMVWEVIKAPLIVPLLNMAVYICLAMALMLFMERVYMGIVIILVKLFWKKPHQRYKFEPLQEDEELGNTNFPVVLVQIPMFNEKEVYKVSIGAACNLSWPADRLVIQVLDDSTDPAIKQMVEMECQRWASKGINITYQIRETRGGYKAGALKEGLKRSYVKHCEYVAIFDADFRPEPDFLRRSIPFLVGNPDIALVQARWRFVNADECLLTRMQEMSLDYHFTVEQEVGSATHAFFGFNGTAGVWRIAAINEAGGWKDRTTVEDMDLAVRASLRGWKFLYLGDLQAKSELPSTLRAFRFQQHRWSCGPANLFRKMVMEIVRNKKVRFWKKVYVIYSFFFVRKIIAHMVTFFFYCLVIPLTILIPEVHVPIWGAVYIPSVITILNSVGTPRSIHLLFYWILFENVMSLHRTKATFIGLLEYGRANEWVVTEKLGDSVNSNNKNKPGDAAKKNAATKAPKKTTRSKFVERLNLLELGFAAFLFLCGCYDFVHGKHNYFIYLFLQTITFSIVGFGYVGTIV 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01798 543 PANTHER GLUCOMANNAN 4-BETA-MANNOSYLTRANSFERASE 9 22 541 - -
Viun11g01798 543 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 87 316 IPR029044 -
Viun11g01798 543 SUPERFAMILY Nucleotide-diphospho-sugar transferases 94 377 IPR029044 -
Viun11g01798 543 Pfam Glycosyl transferase family group 2 190 382 IPR001173 -
Viun11g01798 543 CDD CESA_CaSu_A2 97 333 - -
Viun11g01798 543 MobiDBLite consensus disorder prediction 462 481 - -
Viun11g01798 543 FunFam Glucomannan 4-beta-mannosyltransferase 9 88 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01798 Viun-Chr11 33964316 33970150 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01798 1 543 Miscellaneous Gene Families AT5G22740 80.882 0.0 918
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01798 K13680 - gmx:100791645 1030.39
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01798 11 33964316 33970150 Viun11g01798 11 33964316 33970150 ECH
Viun1g02467 1 35039051 35044357 Viun11g01798 11 33964316 33970150 ECH
Viun7g00863 7 7822456 7828587 Viun11g01798 11 33964316 33970150 ECH