Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03624 ATGTTGTCTGTTGGGAGGTGGATGGCTTTTGTATTTGCTTTTGTTGCAATTGTGCTGTGGGGTTGCGCTGAGGGTAAAGAGTGCACAAACAATATTGCTCAATCACATACTTACCGTTACCAGTTATTAACATCAACGAATGAAACTTGGAACATAATCTCGCATTATAAATTGGCTCCAAAGGATGAACATAACCACGTTTTGTCTGATTTGCTACCAAGGAAGTTGTTGAAAGAGGAACACCAACATGATTGGGATGTGATGTTGAGAAAAACTGAGAAAGTGAGTGTCTTGAAGCCACCCCACCAAGATTTTCTGAAAGAAGTGTCTCTGCATGATGTGAGATTACATGAGGGTTCAGTCCATGGTCGGGCACAACAGACAAACTTAGAATATCTGTTGATGTTGGATGTGGACAGGTTACTCTGGAGCTTTAGGAAAACATCTGGTCTTCCAACTCCTGGAACACCATATGGAGGGTGGGAAGATCCAAAAATAGAGCTTCGAGGTCATTTTGTTGGGCACTACTTGAGTGCATCAGCTTTAATGTGGGCCAGCACACATAATGATATCTTGAAGAAGAAAATGACAGCCCTTGTTGCCAATCTCGCAATCTGTCAAGAGAAAATTGGTACAGGATATCTCTCTGCATTTCCATCTGAATTTTTTGACCGATTTGAAGCTACTGAGCATGTTTGGGCTCCCTATTACACCATTCACAAGATACTGGCTGGTCTTCTGGATCAACATTCTATAGCTAAAAATCCTCAAGCTCTAAATATGGTGAAATGGATGGTAGATTACTTTTACAACAGAGTGCAGAATGTTATAACAAAATTTAGTATAAACAGACACTATCAATCACTGAATGAGGAAACTGGAGGCATGAATGATGTCCTTTACAAGCTATACAGCATAACGGGAGATCAGAGGCATCTACTGTTAGCTCATCTTTTTGACAAGCCATGCTTTTTAGGTTTGCTTGCAGTGAAGGCTAATGATATAGCTAATTTTCATGCTAACACACATATCCCAGTGGTTGTTGGATCTCAAATGCGGTATGAAGTCACTGGTGATCCACTCTATAAGGAAATAGGAACATTCTTTATGGATATTGTTAACTCTTCTCATACTTATGCAACTGGAGGGACATCAGTCGATGAATTTTGGAGTGATCCAAAGAGAATTGGAGACACCCTAGAATCAACCGACAATGAGGAATCATGCACCACTTACAATATGTTGAAGGTTTCACGGCACCTGTTTAGATGGACCAAAAAGGTATCATATGCAGATTATTATGAGCGTGCCTTAACAAATGGTGTATTAAGCATTCAAAGAGGAACAGAAGCTGGAGTGATGATATACATGCTTCCTCAAGGTCGCGGGGTTTCCAAAGCGAAAACTGGCCTTGGTTGGGGAACCAAGTTTGATAGTTTCTGGTGCTGTTATGGAACAGGAATTGAATCATTCTCAAAGCTTGGAGATTCTATCTATTTTGAAGAGAGAGGGAAAAATCCTACTCTCTACATTATCCAGTACATATCAAGCTTCTTCAATTGGAAGTCTGGGCAAATTATTGTTAATCAGACAGTTGTTCCAGCTGTTTCATGGGATCCTTTCCTACGAGTGACATTTACATTTTCTCCAGCTAAGAAAAATGGTGCTTTGTCTACACTTAACTTCAGGCTACCAACTTGGACGCATAAGAATGGTGCACAGGGCGTTTTGAATAATGAGTCTTTATCTCTGCCAACCCCAGGAAATTTTTTGTCTATCACCCGAAAATGGAATGCTGGTGACAAGCTAAGCCTTCAATTTCCGATTACCCTTAGAACTGAGGCCATAAAAGATGACAGGTCTCAATATGCCTCTATTCAAGCAATTCTTTATGGTCCTTATCTTCTTGCTGGTCACACCACTGGTGATTGGGACATCAAAGCTGCACCAAATGCATCTATAGAAGACTGGATCACTCCAATTCCAGCCAGCTACAACAGTCACTTATTCTATTTTTCCCAAGCCTATGCCAACTCAACTTATGTTTTCACAAACTCCAAGCATCCAATAGCAATGCGGAAACTACCTGTGCCCGGAACTGATTTGGCTCTTCATGCAACTTTTAGAGTTATCCAAGGAAAAAAATCTTCCACAAAGTTTACCACTTTGACAGATGTTATTGGCAAAACAATAATGCTAGAACCGTTTGATCATCCGGGAATGCGAGTGATTCACCAAGGAATGGAGCATCCTCTTACAGTAGCAGACTCTTCCTCTGGTGGCTCCTCTTGTGTTTTTGTTGTGGTTCCAGGATTGGATGGACGAAAGGAAACCATATCTTTGGAATCCAAAAGCCATAATGGTTGCTTTGTGCATAGTGGCTTGCATTCTGGTAGAGGAGTGAAACTCAGTTGCAATTCTTCTTCTGATGCTGCATTTAAACAATCTGCAAGTTTTATTGCCAAAAGAGGAATGAGCAAATATGATCCTATCAGCTTTATGGCCAAAGGAGCAAACAAGAATTTTCTTCTGGAACCGTTATTGGCCTTCAGAGATGAGTCTTATACAGCTTATTTCAACATTAAAGGTTGA 2592 0.4062 MLSVGRWMAFVFAFVAIVLWGCAEGKECTNNIAQSHTYRYQLLTSTNETWNIISHYKLAPKDEHNHVLSDLLPRKLLKEEHQHDWDVMLRKTEKVSVLKPPHQDFLKEVSLHDVRLHEGSVHGRAQQTNLEYLLMLDVDRLLWSFRKTSGLPTPGTPYGGWEDPKIELRGHFVGHYLSASALMWASTHNDILKKKMTALVANLAICQEKIGTGYLSAFPSEFFDRFEATEHVWAPYYTIHKILAGLLDQHSIAKNPQALNMVKWMVDYFYNRVQNVITKFSINRHYQSLNEETGGMNDVLYKLYSITGDQRHLLLAHLFDKPCFLGLLAVKANDIANFHANTHIPVVVGSQMRYEVTGDPLYKEIGTFFMDIVNSSHTYATGGTSVDEFWSDPKRIGDTLESTDNEESCTTYNMLKVSRHLFRWTKKVSYADYYERALTNGVLSIQRGTEAGVMIYMLPQGRGVSKAKTGLGWGTKFDSFWCCYGTGIESFSKLGDSIYFEERGKNPTLYIIQYISSFFNWKSGQIIVNQTVVPAVSWDPFLRVTFTFSPAKKNGALSTLNFRLPTWTHKNGAQGVLNNESLSLPTPGNFLSITRKWNAGDKLSLQFPITLRTEAIKDDRSQYASIQAILYGPYLLAGHTTGDWDIKAAPNASIEDWITPIPASYNSHLFYFSQAYANSTYVFTNSKHPIAMRKLPVPGTDLALHATFRVIQGKKSSTKFTTLTDVIGKTIMLEPFDHPGMRVIHQGMEHPLTVADSSSGGSSCVFVVVPGLDGRKETISLESKSHNGCFVHSGLHSGRGVKLSCNSSSDAAFKQSASFIAKRGMSKYDPISFMAKGANKNFLLEPLLAFRDESYTAYFNIKG 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03624 863 Gene3D - 724 854 - -
Viun5g03624 863 SUPERFAMILY AbfB domain 733 844 IPR036195 GO:0046373|GO:0046556
Viun5g03624 863 PANTHER PROLINE-TRNA LIGASE (DUF1680) 23 861 - -
Viun5g03624 863 Pfam Beta-L-arabinofuranosidase, GH127 113 637 IPR012878 -
Viun5g03624 863 SUPERFAMILY Six-hairpin glycosidases 169 481 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03624 Viun-Chr5 45595347 45602813 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03624 K09955 - gmx:100791803 1304.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03624 5 45595347 45602813 Viun5g03624 5 45595347 45602813 ECH
Viun5g03624 5 45595347 45602813 Viun11g02219 11 36982611 36989896 PCT
Viun11g02221 11 36982787 36989896 Viun5g03624 5 45595347 45602813 PCT