Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g02221 ATGTATATCACTCTTAAGAGGATGAAGGCTTTCTTGTTTCTGTTTGTGGCCCTTACTTTGTGCGGCTATGGTGTTTGTAAAGAATGCACAAACGTTCCAACGCAATCACATACATTCCGATACGAGTTATTGGCATCGAAGAATGCAACATGGAGAGAGGAAGTGATGTCTCACTACCACTTGACTCCGACGGACGAAACTGCTTGGGCTGATTTGCTTCCGAGGAAGTTCTTGACAGAACAGAACCAGCATGATTGGGGGATGATGTACAGGAAAATTAAGAACATGGGTGTGTCGAAATCCCCAGAAGGATTTCTTAAAGAAGTGGCTCTTGAAGATGTGAAGTTGGATAAGGATTCGATCCATGGCATAGCTCAGCAGACAAATTTGGAGTATCTGTTGATGTTAGATGTTGACAAATTGCTTTGGAGCTTCAGGAAGACAGCTGGTCTGTCCACTCCTGACACCCCTTATGGAGGGTGGGAAGGTCCTGAAGTTGAGCTTCGCGGTCATTTTGTTGGGCATTACTTGAGTGCATCAGCTCTGATGTGGGCTAGCACACAGGATGATAGCCTGAAGCAGAAAATGTCATCTGTTGTTGCTGGCCTATCTGCTTGTCAGGAAAAAATAGGGACTGGATATCTATCTGCATTTCCTTCTGAGTTGTTTGATCGATTTGAATCTGTTCAACCTGTTTGGGCTCCCTATTATACCATTCACAAGATTTTAGCTGGCCTCTTGGATCAGCACACATTTGCTAGAAACCCTCAAGCTCTAAAAATGGTGACATGGATGGTGGACTACTTCTACAATAGGGTACAGAATGTAATAACAAAGTCCACTATAAATAGGCACTATCAATCGCTAAACGAGGAAACAGGAGGAATGAATGATGTACTTTACAGATTATACAGCATAACAGGAGATTCTAAACATCTATTGTTGGCTCACCTTTTTGACAAGCCGTGCTTTTTAGGGTTGCTTGCAGTGCAGGCCAACGACATAGCTGATTTTCATGCTAACACACATATACCAGTTGTTGTTGGATCTCAAATGCGATATGAAATCACAGGCGATCCACTTTATAAGGAAATTGGGACATTCTTTATGGAACTCGTAAACTCTTCTCACAGCTACGCAACTGGAGGGACATCAGTCAGCGAGTTTTGGAGTAATCCAAAGAGAATAGCAGACAACTTAAGAACAACAGAGAATGAAGAGTCATGCACGACTTATAATATGTTGAAGGTTTCACGCCACCTCTTTAAATGGACCAGAGAAGTCTCTTATGCAGACTACTATGAGCGTGCTTTAACTAATGGAGTTCTCAGCATTCAAAGAGGAACAGATCCTGGAGTGATGATTTACATGCTTCCACTTGGTATTGGAGTTTCCAAGGCTAGAACTGGACACAGTTGGGGAACACCGTTTGACTCTTTCTGGTGCTGCTACGGAACTGGAATTGAATCATTCTCAAAGCTGGGGGATTCTATCTATTTTGAAGAGGAGGGGAAAGGTCCTTCACTTTACATCATTCAGTACATATCAAGCTCATTTAATTGGAAATCTGGCAAAATCTTGCTCAATCAAACAGTTGTTCCAGTTTCTTCATGGGATCCTTACCTACGAGTGACGTTTACGTCATCTCCTGTTGAGAGTGCTTCGTCTACACTGAACTTTCGACTACCAAGTTGGACTAGTACAGATGGTGCCAAGGGGATATTAAATGGTGAATCTTTGTCGCTGCCAAATCCAGGATCTTTTTTGTCAATCACAAGACAATGGAGTGCTAGTGACAAGCTCACCCTTCAGCTGCCCCTTACCGTAAGAACAGAGGCCATAAAAGATGACAGGCCTCAATATGCATCTGTTAAAGCTATTCTTTATGGTCCTTATCTTCTTGCCGGTCATATAAGTGGTGGTGATTGGGACAACCTTAAAATTGAAGCTAAGGATACAGACTGGATCACTCCTGTTCCTGCCAGTTATAATAGCCAACTAGTTTCTTTTTTCCAAGATTTTGAAAAATCGACTTTTGTGTTGGCAAATTCAAACCAATCATTTGCAATGCAAAAGGTACCTGAATCTGGCACTGATTTGGCTCTTAAGGCAACCTTTAGGCTTGTCCTAAAAGAATCTTCCTCAAAGTTTTCAACATTAGCAGATGCTAATGAAAGATCAGTGATGTTAGAACCGTTTGATCTTCCTGGAATGAATGTGGTTCACCAAGGAGCAGATAAACCTCTTCTCATTCAAGATTCTTCCAATGGCAAGCCATCTTCTGTTTTTCTTGTGGTACCAGGATTGGATGGAAGAAATGAAACCATTTCTTTGGAATCACAGAGTGACAAGGGTTGCTATGTTTATAGTGGTTTGAGCTCTAATGCAGGTGTCAAGCTCAGTTGCAAATCTGATTCTGATTCTTCTTTTAAGCAAGCAACAAGCTTTGTTCCTAGGGAAGGATTGAGCCAATACCATCCTATCAGTTTTGTGGCTAAAGGGGTTAGTAGGAATTTTCTTTTGCAGCCATTACTCTCCTTCAGAGATGAGCCTTATACAGTATATTTCAACATTCAAGATTGA 2583 0.4173 MYITLKRMKAFLFLFVALTLCGYGVCKECTNVPTQSHTFRYELLASKNATWREEVMSHYHLTPTDETAWADLLPRKFLTEQNQHDWGMMYRKIKNMGVSKSPEGFLKEVALEDVKLDKDSIHGIAQQTNLEYLLMLDVDKLLWSFRKTAGLSTPDTPYGGWEGPEVELRGHFVGHYLSASALMWASTQDDSLKQKMSSVVAGLSACQEKIGTGYLSAFPSELFDRFESVQPVWAPYYTIHKILAGLLDQHTFARNPQALKMVTWMVDYFYNRVQNVITKSTINRHYQSLNEETGGMNDVLYRLYSITGDSKHLLLAHLFDKPCFLGLLAVQANDIADFHANTHIPVVVGSQMRYEITGDPLYKEIGTFFMELVNSSHSYATGGTSVSEFWSNPKRIADNLRTTENEESCTTYNMLKVSRHLFKWTREVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLGIGVSKARTGHSWGTPFDSFWCCYGTGIESFSKLGDSIYFEEEGKGPSLYIIQYISSSFNWKSGKILLNQTVVPVSSWDPYLRVTFTSSPVESASSTLNFRLPSWTSTDGAKGILNGESLSLPNPGSFLSITRQWSASDKLTLQLPLTVRTEAIKDDRPQYASVKAILYGPYLLAGHISGGDWDNLKIEAKDTDWITPVPASYNSQLVSFFQDFEKSTFVLANSNQSFAMQKVPESGTDLALKATFRLVLKESSSKFSTLADANERSVMLEPFDLPGMNVVHQGADKPLLIQDSSNGKPSSVFLVVPGLDGRNETISLESQSDKGCYVYSGLSSNAGVKLSCKSDSDSSFKQATSFVPREGLSQYHPISFVAKGVSRNFLLQPLLSFRDEPYTVYFNIQD 860
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g02221 860 SUPERFAMILY AbfB domain 754 840 IPR036195 GO:0046373|GO:0046556
Viun11g02221 860 SUPERFAMILY Six-hairpin glycosidases 170 445 IPR008928 GO:0005975
Viun11g02221 860 PANTHER PROLINE-TRNA LIGASE (DUF1680) 25 858 - -
Viun11g02221 860 Pfam Beta-L-arabinofuranosidase, GH127 114 635 IPR012878 -
Viun11g02221 860 Gene3D - 718 845 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g02221 Viun-Chr11 36982787 36989896 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g02221 K09955 - gmx:100781521 1533.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g02221 11 36982787 36989896 Viun5g03624 5 45595347 45602813 PCT