Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g03256 ATGAGTACCCTCTTTCTCGTTTTACTTCTCTCACTACTCACTGTTGGTTCCGGTGGTCGCCACATAGCCGATAAAAACCCCTTTACTCCAAAGGCTTCAGTGGCACGTTACTGGGACAAACACGTTCGCAACACCTTGCCAAGGCCTTCATTCCTCCTTTCCAAGGCCTCCCCAATGACCGCCGCCCAAGCCGCCTCTTTCACAAAGCTTGCCGACACCAACACCCTCTCTACACGGTTGCCGGAGTTCTGCTCCGCCGCGCACCTTCTCTGCTTCCCGGAGGTACGTCCAAGCCTCCAGAAACACACCAAAGATGAGAATTTTCAAACCTACATCGACGGCCAGAACTTCACCAACTACGGAGACGGTAGAGTAAACGGAATCGACACCTTCAAGAACTACTCCAACGACATCTTCAGCACTCCGGTTAACGCTTTCCGTGGATACAGCCGCGGATCCATTGACCACAAAGAAAGCTTCACCGGCTATGCCAGCGGCACCAACGTCGCCGACCAGAGCTTCAACACCTACGGCTCCAAGAGCGGCGGAGAAGGCTCCGGCGACTTCAAAAATTACTCCAGCAATTCGAACGTCGCTGAACTGCGATTCGCCACCTACTCCGACAACACCGTCAATAGGAAGCAGTCGTTCTCCAGCTACAATGAGGACTCAAACGCAGGCGATCAGTCATTCCAGAGCTATGGCAAGAACTCCTTTGCAGCGAAAAACGAATTCACAGGCTATGGAACAGAGTCCAACGTCGCCTCCTCTGGCTTCACCAACTACGGCAAGAAAGGCACAGGTGGCAATAGTACGTTCACCAACTACGGCGTTAACATGAACGATCCCCAAGAGAAATTCCAAAGCTATGGCGATGGAACCGTTGGTGCGACGCACAGCTTTGCCAACTATAGGGACCAAGCTAATGTAGGAGACGATTCGTTCCAATCCTACGAGAAGAACACGTTTGGGTCCACAGTGAATTTCAAAAACTACGGCAACTCCGCCAACCCTGGTTCCGACACTTTCAAAGGTTACGCTAAAGGAGCAGAACGTAACACGGTTGGCTTCACCGGCTACAGCGCTAACACCAACGCAACCTTTAAGGATTACGCCAAAGAGGGTGTTTCCTTCGCTTCTTACAACACCTCTTCCTCTTCTTCCACTGTTGGTGTTAGTTTGGTGAAAAGGTGGGTCGAACCGGGTAAGTTCTTTCGCGAGAGCATGCTGAAGGAAGGAAGCGTGATGGCCATGCCTGACATAAGAGATAAAATGCCCCAAAGATCATTTCTGCCTCGCTCTATTCTGGTGAAATTGCCCTTCTCTTCTTCAAAGATTGAGGAGCTGAAGAGCGTGTTCAAGGTGTCTGATAACTCCTCCATGGAAAAGATGATGATGGATTCTTTGGGTGAGTGCGAGAGAGCACCCAGCGTCGGAGAGATCAAACGTTGTGTGGGCTCTGTCGAGGACATGATTGATTTTGCAACCTCTGTTTTGGGCCGTAATGTCGGGGTTTGGACAACTGAGAACGTAAACGGGTTCAGTAAGAATGTAATTGTGGGTCGGGTCAAAGGGATGAACGGTGGCAAGGTAACCAAATCCGTTTCCTGTCACCAGAGCTGGTTCCCTTATCTGCTTTACTACTGTCACTCGGTTCCTAAGGTTCGGGTCTACGAAGCGGATCTCTTGGATTCGGAAACGAAGGCGAAGATTAACCACGGTGTTGCCATATGTCACTTGGACACCAGTGCATGGAGCCCCACCCACGGCGCATTCGTGGCTCTTGGGTCGGGTCCGGGTCGGATTGAAGTATGCCATTGGATCTTCGAGAATGACATGACTTGGACCGTTGCAGATTGA 1860 0.5108 MSTLFLVLLLSLLTVGSGGRHIADKNPFTPKASVARYWDKHVRNTLPRPSFLLSKASPMTAAQAASFTKLADTNTLSTRLPEFCSAAHLLCFPEVRPSLQKHTKDENFQTYIDGQNFTNYGDGRVNGIDTFKNYSNDIFSTPVNAFRGYSRGSIDHKESFTGYASGTNVADQSFNTYGSKSGGEGSGDFKNYSSNSNVAELRFATYSDNTVNRKQSFSSYNEDSNAGDQSFQSYGKNSFAAKNEFTGYGTESNVASSGFTNYGKKGTGGNSTFTNYGVNMNDPQEKFQSYGDGTVGATHSFANYRDQANVGDDSFQSYEKNTFGSTVNFKNYGNSANPGSDTFKGYAKGAERNTVGFTGYSANTNATFKDYAKEGVSFASYNTSSSSSTVGVSLVKRWVEPGKFFRESMLKEGSVMAMPDIRDKMPQRSFLPRSILVKLPFSSSKIEELKSVFKVSDNSSMEKMMMDSLGECERAPSVGEIKRCVGSVEDMIDFATSVLGRNVGVWTTENVNGFSKNVIVGRVKGMNGGKVTKSVSCHQSWFPYLLYYCHSVPKVRVYEADLLDSETKAKINHGVAICHLDTSAWSPTHGAFVALGSGPGRIEVCHWIFENDMTWTVAD 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g03256 619 ProSiteProfiles BURP domain profile. 404 618 IPR004873 -
Viun3g03256 619 SMART BURP_2 402 618 IPR004873 -
Viun3g03256 619 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 7 619 - -
Viun3g03256 619 Pfam BURP domain 404 616 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g03256 Viun-Chr3 39436332 39438702 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g03256 - - var:108321369 1013.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03256 3 39436332 39438702 Viun9g01193 9 10973666 10976083 ECH
Viun3g03256 3 39436332 39438702 Viun3g03256 3 39436332 39438702 ECH
Viun2g01222 2 22918122 22920954 Viun3g03256 3 39436332 39438702 PCT