Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun9g01193 ATGATCATCCACTTCTTCTTCTGCTTCTTCTTGTCGCTCTCATCTTTCCATGTTTCTCTGGCAAGTAATTACACACCTCTGCTTCAAACACGCGAGCGCATAAACCCATTCAGCCCCAAAGCCTCTCTCATTCGCTATTGGAACGCTCGAGTCACCAATAAGGTTCCAATCCCTCACTTTCTTCTGGCCAAAGCTTCACCTCTTACCCCACAACACTATGGTATTCTCAACAAACTTTTGAACGAAAAACCAAAACCCTACAATCCCAAGCTTCACCAATCCCTCTGCTCCTCACCCAACTTATTCTGTTCCTTCGACGTCGACGCATCAAACACGCACACACTCCAGCGCAAAAACGACGACGCCAACTTCGCCGTTTACAACAACAAACACTTCGCTAACTACGGTTCCTCTCGGGTCGACGGAGTCGACTCCTTCAAAAACTACTCCAACGGCCTAAACGCCAACAACGACGCGTTTCGGAGATACAGCGACTCCTCGACGCGCCGTGCCGAACAGTTCAAGAACTACGCCGATAACGGTAACGTTGCGAATACGAATTTCACCAGCTACGGCTCCGCCGCGTCTCAATCCTCCAGCGATTTCAACAACTACGATAAAACGGTGAACGTTCCCAACCTCGGTTTCACCACCTACGACTCTGGCTCCTCCAACCACAAACTCTCGTTCGCCAGCTACGGCAACGAAACAAACTCCGGATCGCAATCCTTCTCCAGCTACGGGAAACGCGTCATTGGCGGAACCAGCGAGTTCAAGAATTACGCCAGCGACGCGAACATTCTGCAATCGAAATTCAACAATTACGGCGACTTCAGCGCGGGAGCAGCCAACGACTCCTTCAGGTCCTACAGCTTCAACGGTAACAATCCGCGGAACGTTTTCAAAACATACGGAGCCGGATCGAGAGGATCCGCCGCCGACAATTTCATCAGTTACCGGAACCGCGCCAATGTCGGCGACGACTCGTTCGAAAGCTACGCCGCGAGGTCGAAGTCCGGCACCGCCTCATTCGAGAACTACGGCATGTCGTTCAACGTCGGAAACGACAGTTTCGCGGAGTACGGAAAGGGCGCGACGGGGAAGAGTTCGTTCGGGTTTAAATCTTACGGCTTAGGCCGCGCGTTTAAAGTGTACAACAAAGACGGCGCGTCGTTTTCAGAGTATCGCAATTTCAGCGCAACAAGTGGCAGAGTTGTTAATAAGCGGGTGGAGCCGGGTAAGTTCTTCAGAGAATCGATGATGAAGGAAGGGAACGTGATTACAATGCCTAACATTAAAGATAAAATGCCTGCAAGGTCGTTTTTGCCCCTGGCGATTGCTTCGAAATTACCGTTCTCGTCGGCAAGGATAGACGAAATGAGGGAATTGTTCGACGCGCGGGAGGGGTCTTCGACGGAGCGCGTGATGGTTAACGCGTTGGGTGAGTGCGAGAGGGCGCCGAGCCGGGGAGAGACGAAACGGTGTGTTGCGTCTGCAGAGGAGATGATAGAGTTTGCGGCATCGGTGCTGGGTCCCAGTGCTGTGGTGAGGACCACGGAGAATGTGAACGGTTCAGGATCGAGTGTGATGATTGGTAAGGTCTACCCAATGGACGGTGGAAAAGTAACGAAATCAGTTTCGTGTCATCAGAGTTTGTACCCTTACTTGCTGTATTATTGCCACAGTGTACCCCGAGTGAGAGTTTATGAAGCTGATATCCTTAACGTGGAAACCAAGGAGAAGATGAATTATGGCGTTGCCATCTGTCACATTGACACGTCAGCATGGGGCCCGGAACATGGGGCATTCTTGGCATTGGGGTCAGGCCCTGGGAAGATTGAGGTGTGCCACTGGATTTTCGAGAACGACATGACGTGGACCACTTGA 1887 0.5162 MIIHFFFCFFLSLSSFHVSLASNYTPLLQTRERINPFSPKASLIRYWNARVTNKVPIPHFLLAKASPLTPQHYGILNKLLNEKPKPYNPKLHQSLCSSPNLFCSFDVDASNTHTLQRKNDDANFAVYNNKHFANYGSSRVDGVDSFKNYSNGLNANNDAFRRYSDSSTRRAEQFKNYADNGNVANTNFTSYGSAASQSSSDFNNYDKTVNVPNLGFTTYDSGSSNHKLSFASYGNETNSGSQSFSSYGKRVIGGTSEFKNYASDANILQSKFNNYGDFSAGAANDSFRSYSFNGNNPRNVFKTYGAGSRGSAADNFISYRNRANVGDDSFESYAARSKSGTASFENYGMSFNVGNDSFAEYGKGATGKSSFGFKSYGLGRAFKVYNKDGASFSEYRNFSATSGRVVNKRVEPGKFFRESMMKEGNVITMPNIKDKMPARSFLPLAIASKLPFSSARIDEMRELFDAREGSSTERVMVNALGECERAPSRGETKRCVASAEEMIEFAASVLGPSAVVRTTENVNGSGSSVMIGKVYPMDGGKVTKSVSCHQSLYPYLLYYCHSVPRVRVYEADILNVETKEKMNYGVAICHIDTSAWGPEHGAFLALGSGPGKIEVCHWIFENDMTWTT 628
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun9g01193 628 SMART BURP_2 413 628 IPR004873 -
Viun9g01193 628 Pfam BURP domain 415 627 IPR004873 -
Viun9g01193 628 ProSiteProfiles BURP domain profile. 415 628 IPR004873 -
Viun9g01193 628 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 26 627 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun9g01193 Viun-Chr9 10973666 10976083 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun9g01193 - - gmx:100784264 1024.23
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g03256 3 39436332 39438702 Viun9g01193 9 10973666 10976083 ECH
Viun9g01193 9 10973666 10976083 Viun9g01193 9 10973666 10976083 ECH