Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g01222 ATGAACGAACAACTCACGCTGCTCTGTCTCTTTATCCTCTTCTCATCTCTCAGTGTCACGTTCGCCGGGGCCGCCGACGGAGACAAAAACCCGTTCACGCCCAAAGCCTACGCGATTCGCTATTGGGACAAAGAGATCCGCAGCACGCTGCCCAAGCCTCCGTTTATTTTGTCCAAGGCGTCGCCGCTGAGTGCGGTGGAGTCCGCGGCGTTTGTGAAACTCGCGGCTCAGAACGCGCTTGACCAGCGGCTGCCGGAATTCTGCGCCGCCGCGAAGCTCCTCTGCTTCCCGGAGGTGGGGTCCAGCCTTGAGAAGCACGACAAAGACGCCAACTTCGCTGTGTACAGAGACAAGAACTTCACCAACTACGGAACGGGTCGACCCGGTGGAGTGGATTCGTTCAAGAACTACTCAGAAGGGGAGAATATTCCGGTGAACGATTTCCGGCGCTACAGCAGGGACTCCGCCGGGCACAAGGACAGTTTTTTGAGCTACAGCACCGAGGGGAACGTGGTGCAGCAGAGCTTCCACACTTACGCCGCCGGAGCCACAGGCGGAACTGGCGATTTCAAGCGCTACTCTGACGAGACCAACGTCCCGAATCTCGATTTCACCTCCTACTCCGACGACGCCAACGGGAGAACCCAGTCGTTCAATTCTTACTCCGAAAACGGCAATGCCGGAGAGCAATCGTTCTCCTCGTACGGTAAAAACGGCAACGGTCCGACCAACACGTTCAACTCTTACGGGACAGGGTCCAACGTTGTGGGCTCCGGGTTCAACAACTACGCCGAAAACGCAAATGCCCCCAACGACACCTTCAAAGGCTACGGCGTCGACATGAACAACCCCACCAACACGTTCTCCAACTACGCCGCCGGCGGAAACGGCGCCGTCGAGAAGTTCTCCAATTACCGCGACAGGGCGAACGTGGGCGCCGACTCCTTCAGCTCGTACGCGAAATCCGCAAACGCCGCCGACATCGGTTTCAGCACCTACGGCAAATCCTTCAACGAAGGCACCGACGCGTTCATCTCGTACGCGAAATCCTCGAACGGCGGCACGAAGGTGGGTTTCACTTCGTACGGCGTGAACAACACCTTCAAGGAGTACTCAAAAGAAGGCCCCACTTTCTCGTTCTCGAAGTACACGAACGTGAGCACAACGCTGAGCGTTTCGGCAACCGCGGCGAGTGGCAAGATGGTAAATAAGTGGGTGGAGCCGGGTAAATTCTTCAGGGAGAAGATGATGAAGGAAGGAACGGTGATGCCGATGCCTGACATAAGAGATAAAATGCCGGAAAGGTCGTTTTTGCCCCGGAGCATTTTGTCCAAATTACCGTTTTCCGTTTCCAAGATGGACGAATTGAAGCGCGTGTTCCGAGCCTCTGATAACGGTTCCATGGAAAGGATGATGCGCGAGAGCTTGGAGGAATGCGAGCGTGCGCCGAGTCGCGGCGAGACGAAACGGTGCGTTGGGTCTCTGGAGGACATGATCGACTTCGCCACGTCCGTTTTAGGGCGAAACGTCGCCGTTCGGAGCACGGAGAACGTGAAGGGGTCGAAGAAGAGTGTGATGGTGGGACCCGTTACGGGAATCAACGGTGGTAAAGTCACCCAATCCGTGTCCTGCCACCAGAGCCTGTTCCCGTACCTCCTCTATTACTGCCACGCGGTTCCTAAGGTTCGGCTCTACCAAGCGGATCTTCTCGACCCGAAAACGAAGACCAAGATCAACCACGGCATTGCCATCTGTCACTTGGACACCTCCGATTGGAGCCCCACCCACGGAGCCTTTCTCTCTCTCGGGTCCGCCCCGGGTCGGATCGAGGTTTGCCACTGGATCTTCCAGAACGACATGGCCTGGACCATTGCCGATTGA 1881 0.5673 MNEQLTLLCLFILFSSLSVTFAGAADGDKNPFTPKAYAIRYWDKEIRSTLPKPPFILSKASPLSAVESAAFVKLAAQNALDQRLPEFCAAAKLLCFPEVGSSLEKHDKDANFAVYRDKNFTNYGTGRPGGVDSFKNYSEGENIPVNDFRRYSRDSAGHKDSFLSYSTEGNVVQQSFHTYAAGATGGTGDFKRYSDETNVPNLDFTSYSDDANGRTQSFNSYSENGNAGEQSFSSYGKNGNGPTNTFNSYGTGSNVVGSGFNNYAENANAPNDTFKGYGVDMNNPTNTFSNYAAGGNGAVEKFSNYRDRANVGADSFSSYAKSANAADIGFSTYGKSFNEGTDAFISYAKSSNGGTKVGFTSYGVNNTFKEYSKEGPTFSFSKYTNVSTTLSVSATAASGKMVNKWVEPGKFFREKMMKEGTVMPMPDIRDKMPERSFLPRSILSKLPFSVSKMDELKRVFRASDNGSMERMMRESLEECERAPSRGETKRCVGSLEDMIDFATSVLGRNVAVRSTENVKGSKKSVMVGPVTGINGGKVTQSVSCHQSLFPYLLYYCHAVPKVRLYQADLLDPKTKTKINHGIAICHLDTSDWSPTHGAFLSLGSAPGRIEVCHWIFQNDMAWTIAD 626
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g01222 626 PANTHER POLYGALACTURONASE 1 BETA-LIKE PROTEIN 2 13 626 - -
Viun2g01222 626 ProSiteProfiles BURP domain profile. 411 625 IPR004873 -
Viun2g01222 626 Pfam BURP domain 411 623 IPR004873 -
Viun2g01222 626 MobiDBLite consensus disorder prediction 201 246 - -
Viun2g01222 626 SMART BURP_2 409 625 IPR004873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g01222 Viun-Chr2 22918122 22920954 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g01222 - - gmx:100797939 1081.24
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g01222 2 22918122 22920954 Viun2g01222 2 22918122 22920954 ECH
Viun2g01222 2 22918122 22920954 Viun3g03256 3 39436332 39438702 PCT