Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun2g02434 ATGAGCACCGGTGACCTTCTCAGCATCGAACCTCTTGAACTGAAGTTCATATTTGAGCTCAAGAAGCAGATCTCGTGTTCTCTTCAATTGTCAAATAAGACCGATAGCTATGTAGCTTTCAAGGTGAAAACGACCAATCCAAAGAAATACTGTGTTCGTCCAAACACTGGAATTGTCTTGCCACGATCTACATGCGATGTTATCGTTACCATGCAAGCGCAAAAGGAAGCTCCGGCTGACATGCAATGCAAGGATAAATTTCTTCTTCAAAGCGTAAGAGTAGAGGATGGAATCGCCGCAAAGGATATCACTGCAGAAATGTTCAACAAGGAAGCGGGGCATGTGGTTGAGGAGTGCAAATTGAGAGTGTTGTATGTCTCTCCGCCTCAACCTCCGTCTCCAGTCCCGGAAGGTTCCGAGGAAGGATCATCACCTAGAGGTTCTGTTTCCGACAATGGAAATATCAGTGGCGCTGACTCCGCTGCAGTAACAAGAGCATTTGCTGAACGACATGATGGTCCAGAAAAGTCTGTTGAGGCAAAAGCTCTTATCTCAAGGCTGACAGATGAAAAGAATAATGCAATCCAACAAAATAACAAGCTTCGTCAGGAACTGGACATGCTGAGACGGGAAAGCAGCAAAAGTCGTGGGGGTGTCTCGATGGTCATTGTCATATTAATTGGCTTACTTGGCATAATTATTGGGTATCTCATGAAGAAGACCTAA 726 0.449 MSTGDLLSIEPLELKFIFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVLPRSTCDVIVTMQAQKEAPADMQCKDKFLLQSVRVEDGIAAKDITAEMFNKEAGHVVEECKLRVLYVSPPQPPSPVPEGSEEGSSPRGSVSDNGNISGADSAAVTRAFAERHDGPEKSVEAKALISRLTDEKNNAIQQNNKLRQELDMLRRESSKSRGGVSMVIVILIGLLGIIIGYLMKKT 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun2g02434 241 ProSiteProfiles Major sperm protein (MSP) domain profile. 6 126 IPR000535 -
Viun2g02434 241 MobiDBLite consensus disorder prediction 127 155 - -
Viun2g02434 241 PANTHER VESICLE-ASSOCIATED MEMBRANE PROTEIN-ASSOCIATED PROTEIN 5 238 IPR016763 GO:0005789
Viun2g02434 241 Coils Coil 184 211 - -
Viun2g02434 241 Gene3D Immunoglobulins 2 130 IPR013783 -
Viun2g02434 241 FunFam Vesicle-associated protein 1-1 1 129 - -
Viun2g02434 241 SUPERFAMILY PapD-like 2 141 IPR008962 -
Viun2g02434 241 Pfam MSP (Major sperm protein) domain 7 111 IPR000535 -
Viun2g02434 241 PIRSF VAMP_assoc_prot 1 240 IPR016763 GO:0005789
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun2g02434 Viun-Chr2 31088787 31093712 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun2g02434 - - gmx:100791280 373.244
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun2g02434 2 31088787 31093712 Viun2g02434 2 31088787 31093712 ECH
Viun2g02434 2 31088787 31093712 Viun3g04174 3 49387751 49391100 PCT
Viun3g04169 3 49363366 49366473 Viun2g02434 2 31088787 31093712 PCT