Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun3g04174 ATGGCGTCAAAGAGCTACTTCAAACAAGAGCACGATCTTGAGAAGAGAAGAGCTGAGGCTGCTAGAATCAGGGAGAAATACCCAGACCGTATCCCTGTGATTGTGGAGAAGGCAGAAAGAAGTGATATTCCAAGTATTGACAAGAAGAAGTACCTTGTACCCGCTGATCTGACAGTTGGACAATTTGTCTATGTTATCCGCAAAAGGATTAAATTAAGTGCAGAAAAGGCAATATTTATCTTTGTGGACAACGTGCTTCCACCTACTGGAGCAATTATGTCTGCTATATATGAGGAGAAGAAGGAAGAGGATGGTTTTCTTTATGTTACATACAGTGGGGAGAACACCTTTGGGGATCTGACTTCTCACTAG 372 0.422 MASKSYFKQEHDLEKRRAEAARIREKYPDRIPVIVEKAERSDIPSIDKKKYLVPADLTVGQFVYVIRKRIKLSAEKAIFIFVDNVLPPTGAIMSAIYEEKKEEDGFLYVTYSGENTFGDLTSH 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun3g04174 123 Gene3D - 1 118 - -
Viun3g04174 123 Pfam Autophagy protein Atg8 ubiquitin like 15 118 IPR004241 -
Viun3g04174 123 SUPERFAMILY Ubiquitin-like 4 118 IPR029071 -
Viun3g04174 123 PANTHER MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED 2 118 IPR004241 -
Viun3g04174 123 CDD Ubl_ATG8 13 115 - -
Viun3g04174 123 FunFam Autophagy-related protein 1 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun3g04174 Viun-Chr3 49387751 49391100 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun3g04174 K08341 - gmx:100818620 228.794
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun3g04174 3 49387751 49391100 Viun3g04174 3 49387751 49391100 ECH
Viun2g02434 2 31088787 31093712 Viun3g04174 3 49387751 49391100 PCT