Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun1g02410 ATGCAGCGAATTTCGATTGCAATTTCACTAATATCCATTTTATTATGTTCCGCTATATTAACTAGAGCTCTTCCTGATGAACCTGAGTTTGGTTACGATGAAGATAGTGCAAATGGGCCTCAACACTGGGGCGATATTAAAGAAGCATGGGCAGCATGCAAAACAGGGCAAATGCAATCTCCTATTGATTTGTCCAGAAACGATGTGCAAGTGATTCCCAAATTATGGGGTCTCAAATATTGGACCTATAACCCTCAATATGCTACACTCTCCAACAGAGGTCACGATGTTGCAGTGGATTATTTGAGAGGGGATGCGGGCTCAATAGACATAGATGGATCATCTTTTTCCCTCGTACAAATCCATTGGCACTGGCCCTCCGAACATACCATCGACGGCCGGAGGTATGACTTGGAGTTGCACATGGTGCATGTTAGCCCACAGCCTGATGGAACAAACAAAACTGCTGTTGTTGGTGTTTTGTACAAGTATGGTTCTCCTGATCCATTGCTCTCTAAGGTGGAACAATACCTAGGGGACATTCCTAAAGAAAATGAAGAGGAAAGTATCGGAGAAATTGATCCCTCAGAGATTATGAGTGGTAAGATGTTCTACAGATACATAGGATCACTCACTGCACCACCTTGCACCGAAGGCATTATTTGGACCATTGATAAGAAGATAAGAAGTGTTTCAAGAAGACAAGTGGAGTTACTGAAGGATACTGTACTTAAACCTTATGCTCCAGGGAATGCAAGGCCACTACAGCCTCTAAATCAGAGGAACCTACAGCTCTACCTTTCAAAGAAGCCTCTCTATTAG 822 0.4307 MQRISIAISLISILLCSAILTRALPDEPEFGYDEDSANGPQHWGDIKEAWAACKTGQMQSPIDLSRNDVQVIPKLWGLKYWTYNPQYATLSNRGHDVAVDYLRGDAGSIDIDGSSFSLVQIHWHWPSEHTIDGRRYDLELHMVHVSPQPDGTNKTAVVGVLYKYGSPDPLLSKVEQYLGDIPKENEEESIGEIDPSEIMSGKMFYRYIGSLTAPPCTEGIIWTIDKKIRSVSRRQVELLKDTVLKPYAPGNARPLQPLNQRNLQLYLSKKPLY 273
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun1g02410 273 Gene3D Alpha carbonic anhydrase 27 271 IPR036398 -
Viun1g02410 273 ProSiteProfiles Alpha-carbonic anhydrases profile. 28 267 IPR001148 -
Viun1g02410 273 PANTHER CARBONIC ANHYDRASE 28 261 IPR023561 GO:0004089|GO:0008270
Viun1g02410 273 Pfam Eukaryotic-type carbonic anhydrase 38 264 IPR001148 -
Viun1g02410 273 SMART Carb_anhydrase_2a 32 267 IPR001148 -
Viun1g02410 273 ProSitePatterns Alpha-carbonic anhydrases signature. 127 143 IPR018338 GO:0004089|GO:0008270
Viun1g02410 273 CDD alpha_CA_prokaryotic_like 39 261 IPR041891 -
Viun1g02410 273 SUPERFAMILY Carbonic anhydrase 29 262 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun1g02410 Viun-Chr1 34545037 34547194 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun1g02410 K01674 - gmx:100799362 397.897
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02410 1 34545037 34547194 Viun7g01001 7 10300183 10303759 PCT
Viun7g01002 7 10319727 10322868 Viun1g02410 1 34545037 34547194 PCT