Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01001 ATGAATCACCGAATGAGATGCAGAGTTTTTGTTCCAAATCTGATAATACTTGTCATCATCCTACTCCATTCAACAACATGGACTAGAGCACAGGAAGTTGAGGATGAGAGTGAGTTTGATTACATAAGAGGGAGTGAGAAGGGTCCCTCACACTGGGGGGAACTGAAGAAGGAATGGGAAACATGTAAAACTGGCAAAATGCAGTCTCCAATTGATTTGTCAAGCCACAGGGTTAGAGTGGTGCCAAACTTGGGGCAGCTAAAGAAGCACTATAAGCCTCAGAATGCTACTGTCAAAAACAGAGGCCATGATATTGAGCTGAAATGGGGAGAAGATGCTGGATCAATAAACATCAATGGCAGTGAATTTTTTCTGCGTCAGTGCCATTGGCACTCACCTTCAGAACATACCATCAATGGAAGGAGGTATGACTTGGAGCTCCACATGGTTCATGAAAGAAAAAGCGAAAATGGAAAAGTGAATATTGCTGTTGTTGGTCTTCTGTTCAAGATTGGTCGACCCGATCCTATTCTCACCAAGTTGTCAAAAATCATAGAAAGCATGGTGGATAATGAAGTAGAAAAGAAAATTGGGGTGTTTGATCCCTCAGAAATTAAATTGGGTGGCAAGAAGTACTACAGATACATTGGTTCCCTCACTGTCCCTCCTTGCACCGAAGGTGTCATTTGGACTATAAATAAAAAGATAAGAAGTGTGTCGAGGGCACAAGTGAATTTACTTAGAGAGGCTGTCCACGATCATGCAGCGCAGAATTCGAGACCTGTACAAGCGCTGAATAAACGAGGGATACAACTCTATGGACCAAAACGCAAGGAATAA 840 0.425 MNHRMRCRVFVPNLIILVIILLHSTTWTRAQEVEDESEFDYIRGSEKGPSHWGELKKEWETCKTGKMQSPIDLSSHRVRVVPNLGQLKKHYKPQNATVKNRGHDIELKWGEDAGSININGSEFFLRQCHWHSPSEHTINGRRYDLELHMVHERKSENGKVNIAVVGLLFKIGRPDPILTKLSKIIESMVDNEVEKKIGVFDPSEIKLGGKKYYRYIGSLTVPPCTEGVIWTINKKIRSVSRAQVNLLREAVHDHAAQNSRPVQALNKRGIQLYGPKRKE 279
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01001 279 ProSitePatterns Alpha-carbonic anhydrases signature. 134 150 IPR018338 GO:0004089|GO:0008270
Viun7g01001 279 PANTHER CARBONIC ANHYDRASE 36 268 IPR023561 GO:0004089|GO:0008270
Viun7g01001 279 Gene3D Alpha carbonic anhydrase 35 278 IPR036398 -
Viun7g01001 279 ProSiteProfiles Alpha-carbonic anhydrases profile. 37 274 IPR001148 -
Viun7g01001 279 CDD alpha_CA_prokaryotic_like 48 272 IPR041891 -
Viun7g01001 279 Pfam Eukaryotic-type carbonic anhydrase 48 271 IPR001148 -
Viun7g01001 279 SUPERFAMILY Carbonic anhydrase 38 270 IPR036398 -
Viun7g01001 279 SMART Carb_anhydrase_2a 41 274 IPR001148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01001 Viun-Chr7 10300183 10303759 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01001 K01674 - gmx:100797935 474.552
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g02410 1 34545037 34547194 Viun7g01001 7 10300183 10303759 PCT