Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun7g01002 ATGAAACTTTCAAGAGTGAAGAGATGTATAGTTCCAACTTTGGTCATGCTTTTTTCGATGGTCTTGTTAGATTCAGCATCAACAAGAGGTGAAGAAGTGGAAGAAATTGAGGACGAGAGAGAGTTTGATTACATGAGAGGAAGTGAAAAGGGACCTAGTCACTGGGGAGAGTTAAAGAAAGAATGGTCAGCTTGTAAACATGGACACATGCAATCTCCCATAGACTTGTCATGTGCCAGAGTCCAAATCATCCCTCGCTGTCAATTACTCTTCACCGATTACTTTTCTTCTAATGCCACCATAATCAACAGAGGCCATGATATTGCTGTATATTGGAAGGGTGATGCCGGCTCAATACAAATCAATGGAACCGAATTCTTTCTGAAACAGTGTCATTGGCACTCTCCTTCTGAACATTCCATCAATGGCAGGAAGTATGACTTGGAGATGCACATGGTGCATGTAAGTATGGAAAACAAAATTTTGGTGGTTGGTGCTTTCTACAAGATAGGGCATCGCCCTGATCGTTTTCTCTCTCAGCTTGAGAAAGATATTGAGCACCTTGTTGAAGGGGAAGTAGAGAGAGAAATTGGAGAGAAAAATCCCTTTGGAATACAGACAAGAGGCAATATGTATTATAGATACTTAGGCTCACTCACCACTCCTCCTTGCACTGAAGGTGTCATATGGAACATTGATAGAAAGATAAGGACAGTGTCGGAAGCACAAGTGAGACTTTTGAGGGACGCAGTGCATGATCATGCAGAGAGGAATTCAAGACCAAGGCAGCCACGTAACCAAAGAGATATATTATACTTCAGATTCAAAAGCAGAGCAAAATCAAAAAAATAA 852 0.412 MKLSRVKRCIVPTLVMLFSMVLLDSASTRGEEVEEIEDEREFDYMRGSEKGPSHWGELKKEWSACKHGHMQSPIDLSCARVQIIPRCQLLFTDYFSSNATIINRGHDIAVYWKGDAGSIQINGTEFFLKQCHWHSPSEHSINGRKYDLEMHMVHVSMENKILVVGAFYKIGHRPDRFLSQLEKDIEHLVEGEVEREIGEKNPFGIQTRGNMYYRYLGSLTTPPCTEGVIWNIDRKIRTVSEAQVRLLRDAVHDHAERNSRPRQPRNQRDILYFRFKSRAKSKK 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun7g01002 283 ProSiteProfiles Alpha-carbonic anhydrases profile. 40 274 IPR001148 -
Viun7g01002 283 SMART Carb_anhydrase_2a 44 274 IPR001148 -
Viun7g01002 283 PANTHER CARBONIC ANHYDRASE 39 268 IPR023561 GO:0004089|GO:0008270
Viun7g01002 283 SUPERFAMILY Carbonic anhydrase 42 272 IPR036398 -
Viun7g01002 283 Pfam Eukaryotic-type carbonic anhydrase 51 272 IPR001148 -
Viun7g01002 283 ProSitePatterns Alpha-carbonic anhydrases signature. 137 153 IPR018338 GO:0004089|GO:0008270
Viun7g01002 283 CDD alpha_CA_prokaryotic_like 51 272 IPR041891 -
Viun7g01002 283 Gene3D Alpha carbonic anhydrase 38 281 IPR036398 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun7g01002 Viun-Chr7 10319727 10322868 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun7g01002 K01674 - gmx:100784540 441.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun7g01002 7 10319727 10322868 Viun7g01002 7 10319727 10322868 ECH
Viun7g01002 7 10319727 10322868 Viun1g02410 1 34545037 34547194 PCT