Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun11g01552 ATGCAGCTTTTTCACAAACCCACCAAGGTTCAATCTCTGGTTAATCTCATCTTAGTCTCTTCTTCATTCTGCGCCCTTTATCTCGTCGTGTCAGTGCTTCTACTGGGGACATCAAAGGTAGTCCACGTGAACAAGACATCACAAGATGTGTCCAGACCTACCACTCTTGATCACCTTGTCTTTGGAATTGCTTCAAGCAAGAGTTCGTGGGACAAGAGGAAGGAATACGTGAAGCTGTGGTGGAACAACACCAACAAAGCAATGAAGGGGTGCGTGTTCCTGGACAGTCTCCCAGATGAAGAACATGTCAGCAATGATACTTCTCTTCCTCCTCTTTGTGTCTCCGAAGACACTTCAAGGTTTCGTTTCACTCACAGGGGTGGACTTCGCTCCGCAATACGCGTTGCACGTGTTGTTGCCGAGACCGTGGCAATGAACAATGATTCAGACGTGAGGTGGTTCGTTTTTGGAGATGATGACACGGTTTTCTTCCCGGAGAACGTTGTCAAAACTCTTTCCAAATATGATCACAACCTCTGGTACTACATTGGTGCACACTCTGAGGTTTATGAGCAGAACCGGGTGTTCGGTTTTGGAATGGCTTATGGTGGGGCAGGTTTTGCTATCAGCTCCTCTCTGGCAAAGGTGTTGGCCAAGGTTTTTGATTCATGTATAGAAAGGTACCCTCATCTCTATGGAAGTGATGGAAGGGTGTACTCTTGCTTGGCAGAACTTGGGGTTGGATTAACACATGAACCCGGTTTTCACCAGGTAGATTTGAAGGGAAACACCTTTGGTTTATTGGCGGCACATCCTTTGACTCCTTTGCTGTCCCTGCATCACCCTGATTATACTGATCCAATCTTTCCGAACATGACAACTACACAAGCTCTGAAGCATTTATTTGAAGCTGTAAATGTGGATTCCCAGAGGGTGCTGCAACAAGCAATTTGCTATGACAGACGGTTTTCATGGACAGTTTCAGTGTCATGGGGCTATGCTGTTCAGGTTTTCCCGAACCACATGCTTTTGCCAGACGTTCTAAAGGTGCAAGAGACATTCAAGCAGTGGAAGAAGGGAAGCATGTTGGCAAAAACATACACTTTCAACACAAGACAACTTCACAACGACCCTTGTAAAAGACCCACCGTTTTCTTCCTAGACACTGTCTCATCTGCCATGGATGGCACCATTAGCAGTTACAAGAAATCTTTCCAGAATTGCTCAAACGATGCCGTGTCACCGAACAAACTGGAAGTGATCAAAGTGGTCTCACAAAAGTTAGACCCTGACATCAAACAGTTACTTGCTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTACTGCGAAGGACAAAATGGAAATCGGAATAAGGGAATGCAAAGACCAGGAAATGGTTTACATGCACTGA 1413 0.4579 MQLFHKPTKVQSLVNLILVSSSFCALYLVVSVLLLGTSKVVHVNKTSQDVSRPTTLDHLVFGIASSKSSWDKRKEYVKLWWNNTNKAMKGCVFLDSLPDEEHVSNDTSLPPLCVSEDTSRFRFTHRGGLRSAIRVARVVAETVAMNNDSDVRWFVFGDDDTVFFPENVVKTLSKYDHNLWYYIGAHSEVYEQNRVFGFGMAYGGAGFAISSSLAKVLAKVFDSCIERYPHLYGSDGRVYSCLAELGVGLTHEPGFHQVDLKGNTFGLLAAHPLTPLLSLHHPDYTDPIFPNMTTTQALKHLFEAVNVDSQRVLQQAICYDRRFSWTVSVSWGYAVQVFPNHMLLPDVLKVQETFKQWKKGSMLAKTYTFNTRQLHNDPCKRPTVFFLDTVSSAMDGTISSYKKSFQNCSNDAVSPNKLEVIKVVSQKLDPDIKQLLAPRRHCCDVLPSTAKDKMEIGIRECKDQEMVYMH 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun11g01552 470 Pfam Protein of unknown function, DUF604 192 443 IPR006740 -
Viun11g01552 470 Gene3D - 46 313 - -
Viun11g01552 470 PANTHER FRINGE-RELATED 17 466 - -
Viun11g01552 470 FunFam Fringe-related protein-like 46 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun11g01552 Viun-Chr11 31857115 31859592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun11g01552 10 436 Glycosyltransferase AT1G05280 54.358 1.00e-175 499
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun11g01552 - - gmx:100813816 831.632
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun5g03054 5 41721200 41722939 Viun11g01552 11 31857115 31859592 PCT
Viun11g01552 11 31857115 31859592 Viun5g03053 5 41711923 41713954 PCT