Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun5g03053 ATGAAAAGGTCACTTCACAGTCCTATCAAAACCAAACCTACTCTGATGAAATTCATCTTGGTCTTCTCTTCATTTTGTGCCATTTCTCTCTGTGTATCCATGTTACTCCTAGCCACACCAAAGATAATAGACGTGCATTCTTCTCCACAAGATGTCTATGAACCTACCACTGTTGATCAACTTGTGTTTGGAATTGCTTCAAGTGGGAATTCCTGGCCTAAGAGAAAGGAATACAGCAGAATGTGGTGGAATTCGAATCCCAATAAAACAATGAGAGGATGTGTTTTTGTAGATTCCCTCCCAAATGAAAACGTAAACAACGATGCTTCTCTTCCTCCTCTTTGTGTCTCTGAGGACACTTCACAGTTTCTCTATACTTACAAGCATGGAGGTCTAAGATCAGCAATCCGTGTAGCACGTGTTGTGAAAGAAACAGTGGCATTGAAACATTCTGGTGTTAGATGGTATGTTTTTGGGGATGATGACACCATTTTCTTTCCTCACAATCTGGTCAAAACTCTTTCCAAATATGATCACAGGCTTTGGTACTATGTTGGGTCCTACTCAGAGATTTATGAGGGCACCCAGGTTTTTGGCTTTGGAATGGCTTTCGGTGGAGGTGGTTTTGCCATCAGTTCCTCCCTCGCACAAGTCCTAGCCAAGGTTCTTGATTCATGCATACAAAGGTATCCTCATCTCTATGGAAGTGATGCTAGGGTCTACTCTTGCATTACTGAATTAGGTGTTGGATTAACACTTGAACCAGGTTTTCATCAGGTTGATTTGCGGGGAAATATCTTTGGCCTTTTGGCTTCTCATCCGTTAACTCCCTTATTGTCCCTACATCACCCAGATCACACTGATCCTATCTTTCCTAACATGTCAACCAAAAAGTCACTGCAACATTTATTTGAAGCTGTTCATGTCGATTCCGAGAGAATCCTACAACAAACAGTTTGTTACGAGAAGAAGTTGTCATGGACAATTTCTGTGTCATGGGGCTATGCTGTTCAAGTGTTCCAAAACAACATGGTTTTGCCAGAGGTTGTGAGAGTGGAGAAAACATTCAAACAGTGGAAGGAAGGAAATGTTTTGTTAGGAACATATACTTTCAACACAAGAGAACTTCACCCTGACCCATGTAAAAGATCCACCATTTTCTATCTAGATAAGGTGTCTTCCGGCAAAGATGGCATCACAAGCACTTACAGGAAACATTCTGAAAATTGTACATACAAGGGACCAATGCAGAAATTGAGTGTGATCAAAGTTGTTACAAATAAGTTATACATTGACAACAAACAGACTCCAAGAAGGCACTGTTGTGATGTGTTGCCCTCTAATGCTGGTGACTTAATGGAAGTTGCAATCAGAGAATGCAGATATGAAGAACTGATTTACATGCACTGA 1410 0.4092 MKRSLHSPIKTKPTLMKFILVFSSFCAISLCVSMLLLATPKIIDVHSSPQDVYEPTTVDQLVFGIASSGNSWPKRKEYSRMWWNSNPNKTMRGCVFVDSLPNENVNNDASLPPLCVSEDTSQFLYTYKHGGLRSAIRVARVVKETVALKHSGVRWYVFGDDDTIFFPHNLVKTLSKYDHRLWYYVGSYSEIYEGTQVFGFGMAFGGGGFAISSSLAQVLAKVLDSCIQRYPHLYGSDARVYSCITELGVGLTLEPGFHQVDLRGNIFGLLASHPLTPLLSLHHPDHTDPIFPNMSTKKSLQHLFEAVHVDSERILQQTVCYEKKLSWTISVSWGYAVQVFQNNMVLPEVVRVEKTFKQWKEGNVLLGTYTFNTRELHPDPCKRSTIFYLDKVSSGKDGITSTYRKHSENCTYKGPMQKLSVIKVVTNKLYIDNKQTPRRHCCDVLPSNAGDLMEVAIRECRYEELIYMH 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun5g03053 469 Gene3D - 49 309 - -
Viun5g03053 469 PANTHER FRINGE-RELATED 21 466 - -
Viun5g03053 469 FunFam Fringe-related protein-like 48 308 - -
Viun5g03053 469 Pfam Protein of unknown function, DUF604 197 442 IPR006740 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun5g03053 Viun-Chr5 41711923 41713954 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun5g03053 55 435 Glycosyltransferase AT1G05280 54.731 5.57e-149 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun5g03053 - - gmx:100779943 793.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun11g01552 11 31857115 31859592 Viun5g03053 5 41711923 41713954 PCT