Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu8g01498 ATGGGACTCGCTCTCATTCTCCTTTCTCTTCTGATTTTCCTCAAAAAGCCCTTTGAGGACGTTAGTCGATACTCCGTTTGGGCTATTCTCACTGTCGTTGTGGTCTTCGAATTCAGCATAGGGGCAACTCTTAGTAAAGGACTTAACAGAGGACTGGGGACTTTGTTAGCTGGAGGTCTAGCTTTGGGAATGGGAATCTTATCACAGTTGGCTGGAAAATGGGAAGAGCTCATCATAACTGTTAGCATCTTCACTGTAGGATTTTGTGCCACATATGCAAAACAATATCCAACAATGAAGGCTTATGAATATGGTTTCCGTGTGTTCTTGATCACCTATTGCTACATTATTGTGTCAGGGTATCGAACAGGAGAGTTTGTTCAAACAGCTATAAATAGATTTTTGCTCATTGCACTTGGTGCTACTGTCGCACTCGGGATAAATGTATGCATATATCCAATATGGGCCGGTGAGGATCTGCATAATCTTGTGGCAAAAAATTTCATGGGCGTTGCTGCATCATTGGAAGGCGTTGTTAATAACTATCTTAATTGTGTTGAATACGAGAGAGTGCCTTCTAAAATTCTTACATACCAAGCTGCAGATGATGTGGTTTACAAAGGCTACAGATCAGCTGTTGAATCTACAAGCACAGAGGATTCATTAATGGGTTTTGCTGTATGGGAGCCACCTCATGGTAGATATAAAATGCTTAGATATCCATGGCAAAATTATGTAAAAGTAAGCGGGGCTCTAAGGCATTGTGCATTTATGGTCATGGCTATGCATGGATGTATACTTTCTGAAATACAGGCACCACCAGAGAAGAGACAAGTCTTTAAAAGGGAGCTTCAGAAGGTAGGTTCTGAAGGGGCAAAAATTCTAAGGGATCTCGGAAACAAAGTAAAAAAAATGGAGAAACTAGGCGAGGAAGACATTCTTTACGAAGTACACGAGGCAGCAGAAGAATTGCAGCAGAAAATTGACAAAAAATCCTTCCTCCTTGTGAATTCAGAGAGCTGGGAAATCGGAAACCGGCCAAGAGGGGAGGGTGATCCTCAAGATCTCTTGAACGTGGATGAAGAAAGACACTTTTTGGAGTACAAGTCTCTAAGTGAAGCTGTGCTTGATCTCAGAGCTGTCAAAGTTCCAAAAGGTTGGGGAGAACAAGCAGCTGCTGAGAAGAAACCTGCAGTGCCTGTAGGTGTTGGTGATGAAAACATGTTCAGGAAACAGATATCTTGGCCTGCTCATATTTCCTTCACAGCAGATGCAGTGACAAAAGAGGAAGAATCTAAAACGTATGAAAGTGCTAGTTCTTTGTCTCTAGCCACTTTTACATCCCTTCTGATCGAATTTGTGGCAAGGCTCCAGAACCTTGTAGATTCTTTCGAAGAGTTAGGCGAGAGAGCAAAATTTAAGGACCCTCTTGAGCAAGCACCAACAACAACTGGAGGGTTTTCGAATCGGTTGTCTAATGTTTTGACGGTCAAGGATTGA 1500 0.4233 MGLALILLSLLIFLKKPFEDVSRYSVWAILTVVVVFEFSIGATLSKGLNRGLGTLLAGGLALGMGILSQLAGKWEELIITVSIFTVGFCATYAKQYPTMKAYEYGFRVFLITYCYIIVSGYRTGEFVQTAINRFLLIALGATVALGINVCIYPIWAGEDLHNLVAKNFMGVAASLEGVVNNYLNCVEYERVPSKILTYQAADDVVYKGYRSAVESTSTEDSLMGFAVWEPPHGRYKMLRYPWQNYVKVSGALRHCAFMVMAMHGCILSEIQAPPEKRQVFKRELQKVGSEGAKILRDLGNKVKKMEKLGEEDILYEVHEAAEELQQKIDKKSFLLVNSESWEIGNRPRGEGDPQDLLNVDEERHFLEYKSLSEAVLDLRAVKVPKGWGEQAAAEKKPAVPVGVGDENMFRKQISWPAHISFTADAVTKEEESKTYESASSLSLATFTSLLIEFVARLQNLVDSFEELGERAKFKDPLEQAPTTTGGFSNRLSNVLTVKD 499
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu8g01498 499 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 1 479 - -
Vimu8g01498 499 Pfam Aluminium activated malate transporter 1 468 IPR020966 GO:0015743
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu8g01498 Vimu-Chr8 20977430 20982441 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu8g01498 1 476 Miscellaneous Gene Families AT3G18440 66.667 0.0 659
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu8g01498 K25841 - gmx:100784461 870.152
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01498 8 20977430 20982441 Vimu11g04744 11 67643029 67643412 ECH
Vimu8g01498 8 20977430 20982441 Vimu8g01498 8 20977430 20982441 ECH
Vimu11g04746 11 67645299 67648190 Vimu8g01498 8 20977430 20982441 PCT