Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04746 ATGGCTCCGAAATTGGTGAAATCGGGGTCGTTCCGTCACGGTTTGGCCGAGAAGAAGGAGAGGCTTCTCTCGGGGAAGAGTAGCAATGATATCTCTCAGATAGGGATTGGCATGGTGATGCAAGAGGAAGACCAATCGAGGATGTTGAAGTGGTGGAGCACGGTTAAGCGTGTAGCTGGGAAAGCATTGGAAATGGGTCGGTCTGATCCGAGAAAAATCATCTTTTCTGCAAAAACGGGTCTTGCTTTGACCCTTCTTTCACTTTTGATTTTCCTCAAAGAACCCTTCAAGGACATGAGTCTTTACTGTGTCTGGGCCATTCTTACGGTTGTTGTAGTCTTCGAATTCAGCATAGGGGCAACCCTGAGCAAGAGCTTAAATGGTGGATTGGGGACGTTGTTGGCTGGAGCACTTTCACTGGGGATGGCAGAGTTATCAACATTGGCTGGAAATTGGGAGCAGCTTATAATTATTATATGCATCTTCGTTGTAGGATTTTCTGCCACATACACAAAACTATACCCTTCTTTCAAGCCTTATGAATACGGGTTCCGCGTGTTCTTGATCACGTACTGTTTCATTACTGTATCCGGGTATCAAACAGGGGAATTTGTTGACACTGCTATAAATAGATTTGTCCTCATTGCACTCGGTGCTGCTGTCTCTTTGGTTGTAAATATCTGTATATACCCCATCTGGGCTGGAGAGGATCTGCATAATCTTGTCATTAAAAATTTCATGGATCTTGCAACATCTTTGGAAGGTATTGCACAATGTCATCTTCATCGTCACATTTCACTCCCAGTTAATACCCTTTGGTTTATTGCTTCTCAAACATTTGGTGTTGTCAGTAACTACCTTCATTGTGTTGAATATAAGAAGGTGCCATCTAAAATTCTTACTTACCAAGTTGCTGATGATCCAATTTACAATGGGTACAGATCGGTCGTTGAATCGACAAGTAAAGAAGATGCATTGATGGGTTTTGCTGTGTGGGAACCACCACATGGTCATTACAAAATGCATAAATATCCATGGAAGAATTACGTGAAATTAAGCGGGTCTCTAAGGCATTGCGCATTTATGGTCATGGCTATGCATGGATGCATACTTTCTGAAATACAGGCCCCAGCTGAGAAGAGACAGGTTTTCCGTGGCGAGCTTCAAAGGGTAGGTTGTGAAGGGGCGAAAGTGTTACGTGAACTTGGAAACAAGGTTCAAAAGATGGAGAAACTAGACCGGGAAGACTTGCTGGATGAAGTGCACGACGCAGCAGAGGAACTGCAAAAGAAGATTGATAAAAAATCATACCTTCTTGTGAATTCAGAGAGCTGGGAAATTGGAAACCGACCAATCGAGGACATAGGAGAAGAAGGAAAAATTCTTGAACACAACTCTCGTAGTGAAGCAGTACTCGACCTGAGAACAGTTGAAATTGCACATTCGTGGGATGGAAATTTAACTCTGGGCAATAACCATGTTGTGCCTGCAACGAATACCTCTGAAAACATGTCCAGGAAACAGACATCTTTGCCTGCTCATATTTATCATCAAAAATCAAATGCCGAGATCAAAGAGGGTCAACAGCTGAAAACTTTCGAAAGTGCTAGTGCCCTGTCTCTAACAACATTTTCATCGCTTCTGATTGAATTTGTGGCAAGGCTTCAAAACTTGGTGGATTCATTTGAAGAACTAGGTGAAACAGCAAACTTTTCTGACCCTCTTGAGCAACGAGAGCCATTAAAATCTCATGGCTTTTGGACCAGGTTGTTTAACTGCTCGAAATTTAAGGACTAA 1797 0.4274 MAPKLVKSGSFRHGLAEKKERLLSGKSSNDISQIGIGMVMQEEDQSRMLKWWSTVKRVAGKALEMGRSDPRKIIFSAKTGLALTLLSLLIFLKEPFKDMSLYCVWAILTVVVVFEFSIGATLSKSLNGGLGTLLAGALSLGMAELSTLAGNWEQLIIIICIFVVGFSATYTKLYPSFKPYEYGFRVFLITYCFITVSGYQTGEFVDTAINRFVLIALGAAVSLVVNICIYPIWAGEDLHNLVIKNFMDLATSLEGIAQCHLHRHISLPVNTLWFIASQTFGVVSNYLHCVEYKKVPSKILTYQVADDPIYNGYRSVVESTSKEDALMGFAVWEPPHGHYKMHKYPWKNYVKLSGSLRHCAFMVMAMHGCILSEIQAPAEKRQVFRGELQRVGCEGAKVLRELGNKVQKMEKLDREDLLDEVHDAAEELQKKIDKKSYLLVNSESWEIGNRPIEDIGEEGKILEHNSRSEAVLDLRTVEIAHSWDGNLTLGNNHVVPATNTSENMSRKQTSLPAHIYHQKSNAEIKEGQQLKTFESASALSLTTFSSLLIEFVARLQNLVDSFEELGETANFSDPLEQREPLKSHGFWTRLFNCSKFKD 598
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04746 598 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 44 577 - -
Vimu11g04746 598 Pfam Aluminium activated malate transporter 64 566 IPR020966 GO:0015743
Vimu11g04746 598 Coils Coil 414 434 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04746 Vimu-Chr11 67645299 67648190 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04746 7 574 Miscellaneous Gene Families AT3G18440 56.860 0.0 635
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04746 K25841 - gmx:100813638 868.226
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g04746 11 67645299 67648190 Vimu8g01498 8 20977430 20982441 PCT