Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g04744 ATGCCTCCGAAACTGGTGAAATCGGGATCGTTTCGTCACGGTTTGGCGGAGAAGAAGGAGAGGCTTCTATCGGAGAAGAGTTTTGGTAATATTTCACAGATGGGGATTGGCGTGGCGATGATGCGAGAGGAAGAACAGTCGTGGATGGCGAAGCGGTGGAACACGGCTAAGAAGGTGGCTGAGAAGGCATGGGAGATGGGTTGCTCTGATCCCAGGAAGGTTGTTTTCTCTGCAAAAATGGGTCTTGCTCTGACCCTTATGTCGTTTTTGATTTACCTCAAAGAACCCTTCAAGGATATGATTAGCTACTCCGTCTGGGCTATTCTAACGGTCGTCGTAGTCTTTGAATTCAGCATAGGTATTATTGTAACTATAACTCTGTAA 384 0.4688 MPPKLVKSGSFRHGLAEKKERLLSEKSFGNISQMGIGVAMMREEEQSWMAKRWNTAKKVAEKAWEMGCSDPRKVVFSAKMGLALTLMSFLIYLKEPFKDMISYSVWAILTVVVVFEFSIGIIVTITL 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g04744 127 Pfam Aluminium activated malate transporter 64 120 IPR020966 GO:0015743
Vimu11g04744 127 PANTHER ALUMINUM-ACTIVATED MALATE TRANSPORTER 10 46 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g04744 Vimu-Chr11 67643029 67643412 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu11g04744 7 124 Miscellaneous Gene Families AT3G18440 48.889 2.94e-35 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g04744 K25841 - gmx:100818845 160.614
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu8g01498 8 20977430 20982441 Vimu11g04744 11 67643029 67643412 ECH
Vimu11g04744 11 67643029 67643412 Vimu11g04744 11 67643029 67643412 ECH