Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03770 ATGGCAGGAGTTGCACCACCACCCAAACCAGAAGAGCTTCAGCCACACCCTGTGAAAGATCAACTTCCAAATGTTTCGTACTGCATCACTAGTCCTCCTCCTTGGCCGGAGGCGATTCTCCTTGGTTTTCAACATTATCTGGTGATGCTTGGCACAACTGTTCTAATACCAACCTCTCTAGTTAGTCAGATGGGAGGAGGAAACGAAGAAAAAGCAAAAATGATCCAGACTCTGCTGTTTGTAGCTGGCGTGAACACATTGTTCCAAACACTGTTTGGGACTCGTCTACCTGTAGTTATTGGAGGATCCTACACCTTTGTGCCTACTACCATTTCAATAATTTTGGCTAGTCGCTACAGTGACATTCTGAATCCTCAGGAGAGATTTGAGAGGATAATGCGTGGGACACAGGGTGCGCTTATCGTTGCTTCTACCCTCCAAATTGTTGTTGGATTCAGTGGACTTTGGCGCAATGTAGTAAGGTTCTTAAGCCCTCTCTCTGCAGTTCCCCTGGTTGCTCTGTCTGGCTTTGGACTTTATGAGTTGGGCTTTCCTGTGCTTGCAAAATGTGTGGAGATTGGGCTGCCAGAAATTGTAATCTTACTAGTATTTTCACAGTACATTCCTCATGTGATGAAAGGACAAAAGCCTATCTGTGATCGATTTGCAGTTATATTCTCGGTAGCAATTGTGTGGATTTATGCTCATCTTCTAACTGTGGGTGGAGCATATAAACATGTACCACAGGAAACTCAGGATACTTGCAGAACTGATCGTGCTGGCATTATAAGTGGTGCACCTTGGATTAAAATCCCATATCCATTCCAATGGGGAGCTCCTACATTTGATGCTGGGGAAGCTTTTGCTACGATGGCTGCTTCATTTGTTGCACTAGTAGAGTCAACCGGTGCTTTTATTGCTGTTTCAAGGTATGCAAGTGCAACTCCATTGCCACCTTCAGTTCTTAGCCGTGGGGTTGGTTGGCAGGGGGTGGGAATTTTGTTATCTGGCATCTTTGGAACAGGGAATGGATCATCAGTTTCTGTAGAAAATGCTGGACTCTTAGCTTTGACAAGAGTTGGTAGCCGAAGGGTTGTTCAAATATCAGCTGGATTCATGATCTTTTTCTCCATACTTGGAAAATTTGGAGCTGTGTTTGCTTCAATCCCAGCACCAATAGTTGCAGCTTTATATTGCCTTTTCTTTGCCTATGTGGGTTCTGCAGGCCTCAGTTTCCTTCAGTTTTGCAATTTAAACAGCTTCAGAACTAAATTCATCTTGGGATTCTCTATTTTCATGGGCCTCTCTATACCACAATACTTCAATGAGTACACAGCATTTAAGAACTATGGTCCAGTGCACACCCATGCCAGATGGTTCAACGACATGATCAATGTCCCATTTTCATCAAAAGCATTTGTTGCTGGTTCGTTGGCACTGTTCTTGGATGCTACATTGCACAACAAAGACAATCAAACTCGTAAAGACAGAGGCATGCATTGGTGGGACAGATTCAGATCGTTCAAGACAGATACAAGGAGTGAAGAGTTTTACTCACTTCCTTTCAATCTAAACAAGTTCTTCCCCTCCGTGTGA 1596 0.4386 MAGVAPPPKPEELQPHPVKDQLPNVSYCITSPPPWPEAILLGFQHYLVMLGTTVLIPTSLVSQMGGGNEEKAKMIQTLLFVAGVNTLFQTLFGTRLPVVIGGSYTFVPTTISIILASRYSDILNPQERFERIMRGTQGALIVASTLQIVVGFSGLWRNVVRFLSPLSAVPLVALSGFGLYELGFPVLAKCVEIGLPEIVILLVFSQYIPHVMKGQKPICDRFAVIFSVAIVWIYAHLLTVGGAYKHVPQETQDTCRTDRAGIISGAPWIKIPYPFQWGAPTFDAGEAFATMAASFVALVESTGAFIAVSRYASATPLPPSVLSRGVGWQGVGILLSGIFGTGNGSSVSVENAGLLALTRVGSRRVVQISAGFMIFFSILGKFGAVFASIPAPIVAALYCLFFAYVGSAGLSFLQFCNLNSFRTKFILGFSIFMGLSIPQYFNEYTAFKNYGPVHTHARWFNDMINVPFSSKAFVAGSLALFLDATLHNKDNQTRKDRGMHWWDRFRSFKTDTRSEEFYSLPFNLNKFFPSV 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03770 531 PANTHER XANTHINE-URACIL / VITAMIN C PERMEASE FAMILY MEMBER 6 529 - -
Vimu7g03770 531 Pfam Permease family 37 441 IPR006043 GO:0016020|GO:0022857|GO:0055085
Vimu7g03770 531 NCBIfam purine/pyrimidine permease 39 437 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03770 Vimu-Chr7 33243536 33247704 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g03770 4 531 Organic Solute Cotransporters AT1G60030 82.197 0.0 910
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03770 - - gmx:100814601 1022.69
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03770 7 33243536 33247704 Vimu11g02570 11 45429619 45433693 PCT
Vimu7g03770 7 33243536 33247704 Vimu10g01172 10 11399846 11405313 PCT