Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03146 ATGGCAAACAAGTTCCATGTTCGCTCTAACAGTTTTCCTTCTGGATCTCATCCAAACATCAGTAGAGTAGAGGAAGAGCTGAACAAGCTGAAAACTTGGGAAGCCACTAAAACATCCACATCAAAGTCAGTTGGCACTGGCTTGTCCTTGTTATCAGATTTGCTTATTTGCTTGGAAGATATTCTCAACATGGCATCAACCCAAAAGCTGATTTCTAATCATCAAGGTGAGAAATGCATGGAAGAGATAATGGATGGTTCAGTGAGAATTTTGGATATCTGTGGCATCACAAGAGACACCATGTTACAGATGAAGGAGAATGTTCAAGCCCTTCATTCTGCTCTTAGAAGGAGAAAGGGGGATTCAATCATTGAAAGAATTGTAGCCGAATATAATTTCTTCTCTAAGAACATGAAGAAGAATGCCAAGAAGTTGATGACATCTTTGAAGCAGAGGGAGAGCAAATTTGGAGTATCACCAGTCTTGGATCACGATCAACAACTTGTTTCTTTGGTTAGAGTGGTCAGGGAAGTGATTGGAATGAACATGTCTGTCTTCCAATCCCTGTTAGCTTTCTTGACCGTGCCTGCTTCAAAGTCAAAGGCAACCAAATGGGTATTGGTAGCAAAATTAATGCATAAAGGAGTGATAGCATGTGAAGAGAAGCAGAAGAATTTGAACGAGTTGCAGTGTGTGGAAGCATCTTTAAGCAGCCTTATGAGTGAAGGAACCAATGTTGCAAAGATGGAAGCTGCAAATGAAAGATTGAAAGCTTTGGAGAATGGAATTGAAAGCATAGAAAATGGTTTGGAGAGCGTATTTAGGCGCATGGTTAGAACAAGAGCCTGCCTTTTGAACATCATGACTCAATAG 873 0.4055 MANKFHVRSNSFPSGSHPNISRVEEELNKLKTWEATKTSTSKSVGTGLSLLSDLLICLEDILNMASTQKLISNHQGEKCMEEIMDGSVRILDICGITRDTMLQMKENVQALHSALRRRKGDSIIERIVAEYNFFSKNMKKNAKKLMTSLKQRESKFGVSPVLDHDQQLVSLVRVVREVIGMNMSVFQSLLAFLTVPASKSKATKWVLVAKLMHKGVIACEEKQKNLNELQCVEASLSSLMSEGTNVAKMEAANERLKALENGIESIENGLESVFRRMVRTRACLLNIMTQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03146 290 Coils Coil 249 269 - -
Vimu7g03146 290 PANTHER OS06G0725500 PROTEIN 2 288 - -
Vimu7g03146 290 MobiDBLite consensus disorder prediction 1 18 - -
Vimu7g03146 290 MobiDBLite consensus disorder prediction 1 20 - -
Vimu7g03146 290 Pfam Protein BPS1 47 287 IPR004320 GO:0048364|GO:0048367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03146 Vimu-Chr7 26644157 26645029 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03146 - - gmx:100801249 451.055
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03146 7 26644157 26645029 Vimu7g03146 7 26644157 26645029 ECH
Vimu7g03146 7 26644157 26645029 Vimu7g03146 7 26644157 26645029 PCT
Vimu7g03146 7 26644157 26645029 Vimu7g03141 7 26609895 26610755 PCT
Vimu7g03147 7 26646550 26647422 Vimu7g03146 7 26644157 26645029 PCT