Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03141 ATGGCAAACAAGTTCCATATTCGCTCAAACAGTTTCCCTACTGGATCTCATCCTAGCATCAGTAGAATAGAGAAAGAGCTGACCAAGCTCAAAACATGGGAAGCCAGTTCCACATCCACATCAAACTCAATTGGCACTGGCTTGTCCTTGTTATCAGATTTGCATATTTGCTTGGAAGATGTTCTCAACATGGCTTCAACCCAGAAGCTGATTTCTAACAATCAAGGTGAGAAATTCATAGAAGAGCTTCTGGACGGTTCAGTGAGAATTTTGGACATCTGTGACATCACAAGGGACACCTTGTTACAGATTAAAGAAAATGTTGAATCCCTTCATTCTGCTCTCAGAAGGAGAAAGGGGGATTCAAGCATTGAAAGAATTGTAGTCGAATATAATTTCTTCTCAAAGAAGATGAAGAAGAATGCCAAGAAGTTGATGACAACTTTAAAGCAGATGGAGAACAAATTTGGAGTATCCCCTGTGATGGATGAAGACCAACAACTTGTTTCTTTGATTAGAGTGGTTAGGGAAGTCATTGGAATGAACATGTCTGTCTTCCAATCCCTGTTAGCTTTCTTGGCCGTGCCTGCTTCAAAGTCAAAGGCAACCAAATGGGTATTGGTAGCAAAATTAATGCAAAAGGGAGTGAAAGCACAGAAGAATTTGAACGAGTTGCAGTGTGTGGATGCATCTTTAAGCATCCTTCTGAGTGAAGGAACCAATGTTGCAAAAATGGAAGCTGTTAATGAAAGATTGGAAGCTTTGGAGAATGGAATTGAAAGCATAGAAAATGGTTTGGAGAGCGTATTTAGGCGCATGGTTAGAACAAGAGCCTGCCTTTTGAACATCATGACTCAATAG 861 0.4042 MANKFHIRSNSFPTGSHPSISRIEKELTKLKTWEASSTSTSNSIGTGLSLLSDLHICLEDVLNMASTQKLISNNQGEKFIEELLDGSVRILDICDITRDTLLQIKENVESLHSALRRRKGDSSIERIVVEYNFFSKKMKKNAKKLMTTLKQMENKFGVSPVMDEDQQLVSLIRVVREVIGMNMSVFQSLLAFLAVPASKSKATKWVLVAKLMQKGVKAQKNLNELQCVDASLSILLSEGTNVAKMEAVNERLEALENGIESIENGLESVFRRMVRTRACLLNIMTQ 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03141 286 Pfam Protein BPS1 47 283 IPR004320 GO:0048364|GO:0048367
Vimu7g03141 286 Coils Coil 135 155 - -
Vimu7g03141 286 Coils Coil 245 265 - -
Vimu7g03141 286 PANTHER OS06G0725500 PROTEIN 2 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03141 Vimu-Chr7 26609895 26610755 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03141 - - gmx:100801249 425.631
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03141 7 26609895 26610755 Vimu7g03141 7 26609895 26610755 ECH
Vimu7g03146 7 26644157 26645029 Vimu7g03141 7 26609895 26610755 PCT