Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g03147 ATGGCAAACAAGTTCCATGTTCGCTCAAACAGTTTTCCTACTGGATCTCATCCTAGCATAAGTAGAGTAGAGGAAGAGCTGAACAAGCTGAAAACTTGGGAAGCCATTTCCACATCCACATCAAACTCAATTGGCACTGGCTTGTCCTTGTTATCAGATTTGCATATTTGCTTGGAAGATATTCTCAACATGGCTTCAACCCAGAAGCTGATTTCTAACAATCAAGGTGAGAAATGCATAGAAGAGTTTCTGGACGGTTCAGTGAGAATTTTGGACATCTGTGACATCACAAGGGACACCTTCTTACAGATTAAAGAAAATGTTGAATCCCTTCATTCTGCTCTCAGAAGGAGAAAGGGGGATTCAAGCATTGAAAGAATTGTAGCCGAATATAATTTCTTCTCAAAGAAGATGAAGAAGAATGCCAAGAAGTTGATGACAACTTTAAAGCAGATGGAAAACAAATTTGGAGTATCCCCAGTCTTGGATGAAGACCAACAACTTGTTTCTTTGGTTAGAGTGGTTAGGGAAGTGATTGGAATGAACATGTCTGTCTTCCAATCCCTGTTAGCTTTCTTGGCCGTGCCTGCTCCAAAGTCAAAGGCAACCAAATGGTTATTGGTAGCAAAATTAATGCACAAGGGAGTGATAACATGTGAAGAGAACACAAAAAGTTCCAACGAGTTGATGTGTGTGGAAGCATCTTTAAGCAGCCTCGTAAGTAAAGGTACTAATGTTGCAACGATGCAGACTGCACATGAAAGATTGGAGGCTTTGGAGAATGGAATTGAAATCATAGAAAATGGTTTGGAGAGCGTGTTCAGGCGCATGGTTAAGACAAGAGCCTGCCTTTTGAACATCATGACTCAATAA 873 0.4066 MANKFHVRSNSFPTGSHPSISRVEEELNKLKTWEAISTSTSNSIGTGLSLLSDLHICLEDILNMASTQKLISNNQGEKCIEEFLDGSVRILDICDITRDTFLQIKENVESLHSALRRRKGDSSIERIVAEYNFFSKKMKKNAKKLMTTLKQMENKFGVSPVLDEDQQLVSLVRVVREVIGMNMSVFQSLLAFLAVPAPKSKATKWLLVAKLMHKGVITCEENTKSSNELMCVEASLSSLVSKGTNVATMQTAHERLEALENGIEIIENGLESVFRRMVKTRACLLNIMTQ 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g03147 290 Pfam Protein BPS1 47 287 IPR004320 GO:0048364|GO:0048367
Vimu7g03147 290 PANTHER OS06G0725500 PROTEIN 2 288 - -
Vimu7g03147 290 Coils Coil 135 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g03147 Vimu-Chr7 26646550 26647422 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g03147 - - gmx:100801249 441.425
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g03147 7 26646550 26647422 Vimu7g03147 7 26646550 26647422 ECH
Vimu7g03147 7 26646550 26647422 Vimu7g03147 7 26646550 26647422 PCT
Vimu7g03147 7 26646550 26647422 Vimu7g03146 7 26644157 26645029 PCT
Vimu7g03148 7 26652298 26653375 Vimu7g03147 7 26646550 26647422 PCT