Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02928 ATGAGTGGAGCACTGGTATTCATTCAAGAAGATCTTGGAATCAGTGACCTACAAATACAACTTCTGGTAGGTATGGCGCATTTGTGTGGGCTACCAGGTAGCTTGATCGCAGGAAGAATAGCTGATCATATAGGTCGTCGCTACACCATCATTGTAGCTTCCATCGCCTTCTTATTAGGTTCAGTTCTGATGGGGTATGGCCAACCGTATGCAATCTTAATGATTGGAAATTGTATAGTTGGAGTTGGTGTGAGTTTTGCAATGGTTGTAGCACCACTATATAGTACAGAGATTTCACCTCCTTCTTCCAGAGGGTTTTTTACCTCTCTCCCAACACTTGCCGTCAACACAGGATTCTTGCTTGGATACTTGTCAAACTATTTCTTTGAAAAATTGTCACGGAGAATTGGATGGAGGTTGATGGTGGCTGTTCCAGCAGTTCCTTCACTTTGCCTAATCCTGATCATGCTAAAGCTGGTAGAGTCTCCAAGGTGGTTAGTCATGCAAGGAAAGGTTGGTGAGGCCAGAAAAGTGCTTTTACTAGTCTCTAATGCGAAGGAAGAAGCTGAACAAAGGTTGAGGGAAATAAAAAATGTTGTTGGAATTGATGGAAATTGCACCCTTGACATTGTGGAGGTTCCAAAGAAAACTAGTAGCGGAACAGGAGCTCTGAAGGAGTTGTTTTGTGAAGCTTCACCTGTTGTACGTAGAATACTGTTTTCAGCAGTTGGACTTCATTTGTTCCTGAGGCTTGGTGGAAGTGCGGTTATTTTATTGTATGGTCCAAGGGTGTTTGAGAGAACAGGAATCACTGATAAAAGCAAACTGATGCTTGCCAATGTTGGTATAGGAGTGAGCAAAGTTGTTTTTTCGTTGATATCAATATTCTTGTCAGATAAATTTGGGAGGAAGTTTCTCTTGCTGATTGGTGCTGTAGGTTTGAGTGTGAGCATGTCTGGGTTAGCTGTTTGCTTGATCATAGTGGAAGAATCCAAAGAAAAACTACTTTGGGCACAATATTTGACCATTATTCTTACCTACATCTTTGTGGCTTCTATGTCTATTGGAATAGCACCAGTGACATGGGTTTATAGCTCCGAGATATTTCCCCTTAGGTTCAGAGCACAAGGCCTTAGTATTTGCGTGATTGTGAACAGAATTTTTACCGTGGCAGTGGTTACAAGTTTCATATCGATTTATAAAGCCATAACAATGGGTACGACTTTCATTCTGTATTCGGCTATCAATATTGCGGCTTTGTTTTTCTATACCACTTTGCCTGAAACTAACGGAAGGTCATTAGAAGATATGGAGACTGTCTTTGAAAGAAATTCTAAGTAA 1341 0.4101 MSGALVFIQEDLGISDLQIQLLVGMAHLCGLPGSLIAGRIADHIGRRYTIIVASIAFLLGSVLMGYGQPYAILMIGNCIVGVGVSFAMVVAPLYSTEISPPSSRGFFTSLPTLAVNTGFLLGYLSNYFFEKLSRRIGWRLMVAVPAVPSLCLILIMLKLVESPRWLVMQGKVGEARKVLLLVSNAKEEAEQRLREIKNVVGIDGNCTLDIVEVPKKTSSGTGALKELFCEASPVVRRILFSAVGLHLFLRLGGSAVILLYGPRVFERTGITDKSKLMLANVGIGVSKVVFSLISIFLSDKFGRKFLLLIGAVGLSVSMSGLAVCLIIVEESKEKLLWAQYLTIILTYIFVASMSIGIAPVTWVYSSEIFPLRFRAQGLSICVIVNRIFTVAVVTSFISIYKAITMGTTFILYSAINIAALFFYTTLPETNGRSLEDMETVFERNSK 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02928 446 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 15 444 IPR045262 GO:0015144
Vimu7g02928 446 Gene3D MFS general substrate transporter like domains 1 446 IPR036259 -
Vimu7g02928 446 PRINTS Sugar transporter signature 366 378 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02928 446 PRINTS Sugar transporter signature 74 93 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02928 446 PRINTS Sugar transporter signature 343 364 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02928 446 FunFam probable polyol transporter 4 1 444 - -
Vimu7g02928 446 SUPERFAMILY MFS general substrate transporter 2 438 IPR036259 -
Vimu7g02928 446 ProSitePatterns Sugar transport proteins signature 1. 294 311 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vimu7g02928 446 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 430 IPR020846 GO:0022857
Vimu7g02928 446 ProSitePatterns Sugar transport proteins signature 1. 37 54 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vimu7g02928 446 Pfam Sugar (and other) transporter 15 441 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu7g02928 446 Coils Coil 179 199 - -
Vimu7g02928 446 NCBIfam sugar porter family MFS transporter 14 436 IPR003663 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02928 Vimu-Chr7 24658794 24660134 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02928 1 446 Organic Solute Cotransporters AT4G36670 49.217 1.66e-158 456
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02928 - - gmx:100813954 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02928 7 24658794 24660134 Vimu7g02931 7 24673110 24676866 ECH
Vimu7g02928 7 24658794 24660134 Vimu7g02928 7 24658794 24660134 ECH
Vimu7g02929 7 24662286 24663644 Vimu7g02928 7 24658794 24660134 PCT
Vimu7g02928 7 24658794 24660134 Vimu7g02930 7 24669854 24671593 PCT