Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02931 ATGAAAGTAGGTAACACTGGAGTTATGAGTGGAGCACTGATATTCATAAGGGAGGAGCTAGGAATCAGTGACACCCAACAAGAAGTTCTTGCAGGCATCTTAAACGTTTGTGCATTGGTAGGGTCTTTACTTGCAGGAAGGACCGCTGATTTAGTTGGTCGACGGTGGACAATTTCCTTTGCATCCATCCTTTTCTTGGTTGGTTCAGTACTCATGGGATACGGACCAAACTACGGAATGGTGTTAGCGGGAAGATGTGTGGCGGGTGTTGGAGTGGGTTTTGCTCTTTTGATAGCACCGATTTATTCTTCAGAAATCTCCTCTGCTGAAGCCCGAGGCTTTGTAGCTTCCCTACCTGAGCTTTGTATCGGCATTGGAATTTTAATGGGTTACGTGGTGAACTACTTGTTAGGGAAATTGACTTTGAAGCTTGGATGGAGATTGATGCTTGGTCTTGCAGCAGTTCCTTCACTTGCTTTGGCTGTGGGCATTTTCGCAATGCCGGAGTCTCCGAGGTGGTTGGTGGTGCAAGGCCAGTTAGGAAAAGCAAAGAAAGTTCTATTAAAAGTTTCAGATAGTGAAGAAGAAGCCGAGCGTCGGTTCAGGGAGATAAAAAGTGCTGCTGGGATTGACGAGGATTGCAATGAGGAAACGGTTAAAGTCTCTCGAAAGAGCTCTGGTGATGGGGTTTGGAAAGAGCTGATTTTGAGGCCCTCTTATCCCGTTCGCAGGATGTTGATTGCAGCAGTGGGGATTCACTTTTTTGAGCATGCCACTGGAATCGAAGCTGTTATGTTATACAGTCACAGAATCTTCAAGAAAGCTGGTGTTGTCGGTAAGGACAAGCTTTTGCTCGCCACCATTGGAGTAGGCGTTACAAAAGTCTCTTGCTTGATAATGGCCTCCTTTTATCTTGACAGAGTTGGAAGACGCCGCCTCTTGTTTATAAGCACTACAGGAATGATTTTTAGCCTTACCTTGTTGGGATTCAGCTTGACAATGGTGGAGAAGTCTCATGAGAAGCTGGAATGGGCCTTGGTTCTTAGTTTGGTGTTTACTTATGTATATGTTGGATTTTTCAATCTTGGACTTGCACCTGTCACATGGGTGTATGGCTCAGAGATTTTCCCTCTGAGGTTGAGAGCACAAGGAGCAAGTATAGGAGTTGCAGTGAACAGACTCACCAATGCTTCTATTTCCATGTCTTTTATTACAATCTATAAAGCAATCACTATAGGGGGTACCTTTTTCTTGTTTGCTGGTTCAGCTGTTCTGGCTTTGTTCTTCTTCTACTTTTTCTTGCCCGAAACCAAGGGCAAGGCCTTGGAAGAGATGGAGATGGTTTTCAGCAAAAAGGGTCAAAGGAATGCAACTGCAGAAACCGAACCGGGGCAGAATTTGTAG 1404 0.4501 MKVGNTGVMSGALIFIREELGISDTQQEVLAGILNVCALVGSLLAGRTADLVGRRWTISFASILFLVGSVLMGYGPNYGMVLAGRCVAGVGVGFALLIAPIYSSEISSAEARGFVASLPELCIGIGILMGYVVNYLLGKLTLKLGWRLMLGLAAVPSLALAVGIFAMPESPRWLVVQGQLGKAKKVLLKVSDSEEEAERRFREIKSAAGIDEDCNEETVKVSRKSSGDGVWKELILRPSYPVRRMLIAAVGIHFFEHATGIEAVMLYSHRIFKKAGVVGKDKLLLATIGVGVTKVSCLIMASFYLDRVGRRRLLFISTTGMIFSLTLLGFSLTMVEKSHEKLEWALVLSLVFTYVYVGFFNLGLAPVTWVYGSEIFPLRLRAQGASIGVAVNRLTNASISMSFITIYKAITIGGTFFLFAGSAVLALFFFYFFLPETKGKALEEMEMVFSKKGQRNATAETEPGQNL 467
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02931 467 ProSitePatterns Sugar transport proteins signature 1. 45 62 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 Gene3D MFS general substrate transporter like domains 4 453 IPR036259 -
Vimu7g02931 467 NCBIfam sugar porter family MFS transporter 6 445 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 PRINTS Sugar transporter signature 373 385 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 PRINTS Sugar transporter signature 350 371 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 PRINTS Sugar transporter signature 256 266 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 PRINTS Sugar transporter signature 82 101 IPR003663 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 Pfam Sugar (and other) transporter 23 449 IPR005828 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 FunFam probable polyol transporter 4 2 452 - -
Vimu7g02931 467 ProSiteProfiles Major facilitator superfamily (MFS) profile. 1 438 IPR020846 GO:0022857
Vimu7g02931 467 PANTHER SOLUTE CARRIER FAMILY 2, FACILITATED GLUCOSE TRANSPORTER 6 452 IPR045262 GO:0015144
Vimu7g02931 467 ProSitePatterns Sugar transport proteins signature 1. 301 318 IPR005829 GO:0016020|GO:0022857|GO:0055085
Vimu7g02931 467 SUPERFAMILY MFS general substrate transporter 5 446 IPR036259 -
Vimu7g02931 467 ProSitePatterns Sugar transport proteins signature 2. 87 112 IPR005829 GO:0016020|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02931 Vimu-Chr7 24673110 24676866 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02931 5 449 Organic Solute Cotransporters AT2G18480 67.265 0.0 605
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02931 - - gmx:102661358 706.057
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02928 7 24658794 24660134 Vimu7g02931 7 24673110 24676866 ECH
Vimu7g02931 7 24673110 24676866 Vimu7g02931 7 24673110 24676866 ECH