Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02855 ATGCAGAGAGAGAAAGAGAAGCATTTGGTGTTGATTCACGGCGGCGGCCATGGTGCGTGGTGTTGGTATAAGGTCGCTGAATTGCTGAAATCGAGTGGACACCGTGTGACGGCTCTGGACATGGCTGCCTCCGGGATCCATCCGAAGCAGGCGGAGGAGCTGAATTCAATTTCAGAATACTATGAGCCTTTGATGGAATTTCTGGAGAGTTTGGATGCTGAAGAGCGTGTGATCCTGGTCGGTCATAGCTTGGGTGGGATCGGCATGTGCTTAGCCATGGAAAGCTTCCCCGAAAAGATTGCAGCTGCGGTATTTGTCAGTACCTTGATGCCTTCTCCCGATCTAAGCTTGTTCACTCTTTCTCAGGAGGTGTCCCGGGCTCGTCGAAGATCGGAATCTAAGTATGACAACAACAGCAGTCAACCGGAAAAATCAATTAAATTCTCGCCTGAATTCTTAGCATCCAATTTATACCAACTCTCTCCACCTGAGGATTTGACCTTGGCATTGTCACTGTTGAGACCCACTCGCATTTTTGGTGATGAAGAAATGTCGGGTGAGAATGCTAGACTGACAGAAGAGAAGTATGGAAGTGTGAAGAGGGTGTATATAATGTGCGAGCAAGACAACTTATTCAAACCTGAGGTTCAGCTCTCAATGATTGAACGAAGCCCTCCAAATGATGTCAAAGTCATTGCTGGAGCTGATCACATGGCCATGTTCTCTAAACCACAAGAGTTTTTCTCTCACCTTCAAGAGATCGCCAACACCTATTACTAG 780 0.4718 MQREKEKHLVLIHGGGHGAWCWYKVAELLKSSGHRVTALDMAASGIHPKQAEELNSISEYYEPLMEFLESLDAEERVILVGHSLGGIGMCLAMESFPEKIAAAVFVSTLMPSPDLSLFTLSQEVSRARRRSESKYDNNSSQPEKSIKFSPEFLASNLYQLSPPEDLTLALSLLRPTRIFGDEEMSGENARLTEEKYGSVKRVYIMCEQDNLFKPEVQLSMIERSPPNDVKVIAGADHMAMFSKPQEFFSHLQEIANTYY 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02855 259 PANTHER METHYLESTERASE FAMILY MEMBER 5 256 IPR045889 -
Vimu7g02855 259 SUPERFAMILY alpha/beta-Hydrolases 7 255 IPR029058 -
Vimu7g02855 259 Gene3D alpha/beta hydrolase 1 259 IPR029058 -
Vimu7g02855 259 Pfam Alpha/beta hydrolase family 9 247 IPR000073 -
Vimu7g02855 259 FunFam (S)-hydroxynitrile lyase 4 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02855 Vimu-Chr7 24139797 24141097 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02855 4 166 Miscellaneous Gene Families AT5G10300 38.554 7.18e-36 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02855 - - var:108334626 491.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02855 7 24139797 24141097 Vimu7g02855 7 24139797 24141097 ECH
Vimu7g02855 7 24139797 24141097 Vimu7g02854 7 24133686 24134656 PCT
Vimu7g02856 7 24146935 24149285 Vimu7g02855 7 24139797 24141097 PCT
Vimu7g02855 7 24139797 24141097 Vimu7g02855 7 24139797 24141097 PCT