Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02856 ATGAGTGGGAAAGAGAGTAAGAAAAAGCACTTTGTCCTGGTGCATGGTCTTGGCCATGGTGCTTGGTGCTGGTACAAGCTGAAGCCACTTTTGGCATCAGCTGGGCATAAAGTCACAGTCCTTGACCTTGCAGCTTCAGGCATAGACACACAAAAAATAGAAGACATCCCCACTTTTTATCACTATTCTAAACCTTTGTTGGATCTTTTGGCGTCTCTTCCTCCTAGGGAAACAGTTGTCCTTGTCGGACATAGCTTTGGAGGGATCAACATAGCCCTTGCGATGGAAAATTTTCCAGAAAAAGTATCTCTCGGAGTTTTTCTATCAGCTTTTGCTCCTGATACCCACCACAAACCCTCCCATGTATTACAAGAGTTGACTAAGAAAGAACCAGTCAATGGATGGATGGACTGTGAGATATCGAACAGTGGAAACAAATCGACGATGGTTTTTGGTCCCGAGTTTTTGTCCGCTGTTCTGTACCAACTCTGCTCCACTGAGGATCTGGAATTGGCCAAGACTCTGATAAGGAAAGGCTCACTCTTTCCTGAAGAACTTTCAGAGGCAAAAAATTTCTCCCAAGAGGGTTACGGGTCTGTCTCACGTGCCTATATTGTCCTTAGTGAGGACTTGATAATTCCAAAGGAGTATCAACAATGGATGATCCAAAATGCTGGAATTCATACTGTGAGAGAGATCAATGGAGCAGATCATATGGCTATGCTTGGTAAAACCAAGGATCTCTGTTCGATTCTTCTCGAGATTGCTGATAACTAA 777 0.4376 MSGKESKKKHFVLVHGLGHGAWCWYKLKPLLASAGHKVTVLDLAASGIDTQKIEDIPTFYHYSKPLLDLLASLPPRETVVLVGHSFGGINIALAMENFPEKVSLGVFLSAFAPDTHHKPSHVLQELTKKEPVNGWMDCEISNSGNKSTMVFGPEFLSAVLYQLCSTEDLELAKTLIRKGSLFPEELSEAKNFSQEGYGSVSRAYIVLSEDLIIPKEYQQWMIQNAGIHTVREINGADHMAMLGKTKDLCSILLEIADN 258
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02856 258 PANTHER METHYLESTERASE FAMILY MEMBER 7 257 IPR045889 -
Vimu7g02856 258 SUPERFAMILY alpha/beta-Hydrolases 6 256 IPR029058 -
Vimu7g02856 258 FunFam (S)-hydroxynitrile lyase 6 258 - -
Vimu7g02856 258 Gene3D alpha/beta hydrolase 3 258 IPR029058 -
Vimu7g02856 258 Pfam Alpha/beta hydrolase family 11 242 IPR000073 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02856 Vimu-Chr7 24146935 24149285 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02856 7 169 Miscellaneous Gene Families AT5G10300 55.689 7.17e-56 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02856 - - vum:124844581 491.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02856 7 24146935 24149285 Vimu7g02855 7 24139797 24141097 PCT