Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02854 ATGGAGAGGAAGAAGAAGAGGCGTCTGGTGTTGGTTCACGGAGCCTACCATGGAGCCTGGTGTTGGTACAAGCTCTCTACTCTCCTCAATTCCGCCGGCCTTCAAGTCACGTCTCTCGACATGGCTGCATCCGGCATCCATCCAAACCAAGTGCTTGATATCACTTCAGTTTCACAATATGTTGAACCTTTGCTCCAATTTCTACGATCTTTACCACCAGAGGAACGAGTCATCCTTGTCGGTCATAGTTTTGGAGGCTTATGCATTTCTCTAGCCATGGAGTTCTTCCCCCACAAAATTGCAGCTGCTGTTTTCCTTACCGGTTGGATGCCTGGTCCCCACCTCAGCTATCTCTCACTGTTCCTAGAGTTCAAGCACAGGTTAAGCTTGAAATCCAATTTCGGCTCAAAGACTGTCACAGATGCAAATACCAACGATCATCCGAAGCGATATATGACATGTGATCTTCAAAACTTAGCATCCAACGTCTACCAACAATCTCCACCAGAGGACTTGACCCTGGCGTCTTCACTTTTGAGACCCTTTCCCATCTTCGATGACGAAGATCTGCGAGAAAATACAAAACTGACGGAAGAGAACCATGGAAGTGTGGGCAGAGTCTATATAGTGTGTGAACAAGACAAAATAATGGAGCAGGATTTTCAACTGTCAATGGTTGAAAGAAACCCTCCTAACGAGGTCAAAGTGATTGCTGGAGCTGATCACATGCCCATGTTATCTAAACCACAACAGCTTTTCTCTTACCTTCAAGAGATTGCCAACATCTATTACTAG 795 0.4579 MERKKKRRLVLVHGAYHGAWCWYKLSTLLNSAGLQVTSLDMAASGIHPNQVLDITSVSQYVEPLLQFLRSLPPEERVILVGHSFGGLCISLAMEFFPHKIAAAVFLTGWMPGPHLSYLSLFLEFKHRLSLKSNFGSKTVTDANTNDHPKRYMTCDLQNLASNVYQQSPPEDLTLASSLLRPFPIFDDEDLRENTKLTEENHGSVGRVYIVCEQDKIMEQDFQLSMVERNPPNEVKVIAGADHMPMLSKPQQLFSYLQEIANIYY 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02854 264 PANTHER METHYLESTERASE FAMILY MEMBER 6 260 IPR045889 -
Vimu7g02854 264 FunFam (S)-hydroxynitrile lyase 4 264 - -
Vimu7g02854 264 Pfam Alpha/beta hydrolase family 9 252 IPR000073 -
Vimu7g02854 264 SUPERFAMILY alpha/beta-Hydrolases 3 259 IPR029058 -
Vimu7g02854 264 Gene3D alpha/beta hydrolase 1 264 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02854 Vimu-Chr7 24133686 24134656 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02854 1 111 Miscellaneous Gene Families AT5G10300 54.054 3.64e-35 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02854 - - gmx:100818925 356.295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02854 7 24133686 24134656 Vimu7g02854 7 24133686 24134656 ECH
Vimu7g02855 7 24139797 24141097 Vimu7g02854 7 24133686 24134656 PCT
Vimu7g02854 7 24133686 24134656 Vimu7g02853 7 24130065 24131287 PCT