Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02832 ATGGTTGCAGGAAATTCTCGTTATGAAGCCTCCAAAGAGATCACCGATGTTGTTAAGGGCAGCAGTTGTGATGTTTTCGATGTCATTGACAACCATTCTCGTGGTAGATTGAAGCTAATGAATACTCCTCACCTACTACATTATCCTAAACCTGTATCCTTTAGCAGGTATTGGGAAGTTTCTGTAAATCTTTATCAGTTGCCTTTAATTAGGAACGAGTGTGCTCATAATCCTGTACTGTTCTTTGCCATATTGTCCAATCAGAGATCAGGTAGTGGGTGGTTTGAGACCCTTTTAAATAGCCACATCAATACTTTAGATAAAGTTTACAATTTGGACTGGTTCAATAGTGCTTCGAAGAACGAGTGCTCTGCTGCAACTGGCTTGAAGTGGATGCTTAATCAGGGATTGATGGAACACCATAAGGAAATAGCGGAGTATTTCAACCACAGACGTATTTCTGTTATATTTCTTTTCCGGAGGAACTTGCTACGCAGGATGGTATCAATGCTAGCCAATTCATATGATCGTTATGCCAAGCTATTGAATGGAACACACAAGGCTCATGTACACTCTGCAGAAGAGGCGGATATTCTTTCAAAGTACAAGCCTATCATTAATTCGACATCCTTGCTGGATGACTTGAAGGATATGGAGATAAGATCTGCTAAAGCTTTAGAATACTTCAACAGAACTCGGCATATGATTCTGTACTATGAGGATCTTATGAGAAATCACACTAAACTAAGAGATGTTCAAGAGTTCTTAGGATTGCCTGAGATGGAGTTAACGAGCCGTCATGTTAAGATACATAGAGGACCATTGTCAGACCACATTCAGAACTGGGATGACGTTAACAAAACGCTGAAAGGAACCATTTACGAGAGTTTTCTTGAAGCTGACTATTAG 909 0.4004 MVAGNSRYEASKEITDVVKGSSCDVFDVIDNHSRGRLKLMNTPHLLHYPKPVSFSRYWEVSVNLYQLPLIRNECAHNPVLFFAILSNQRSGSGWFETLLNSHINTLDKVYNLDWFNSASKNECSAATGLKWMLNQGLMEHHKEIAEYFNHRRISVIFLFRRNLLRRMVSMLANSYDRYAKLLNGTHKAHVHSAEEADILSKYKPIINSTSLLDDLKDMEIRSAKALEYFNRTRHMILYYEDLMRNHTKLRDVQEFLGLPEMELTSRHVKIHRGPLSDHIQNWDDVNKTLKGTIYESFLEADY 302
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02832 302 Gene3D - 81 288 IPR027417 -
Vimu7g02832 302 Pfam Sulfotransferase domain 84 267 IPR000863 GO:0008146
Vimu7g02832 302 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 67 104 - -
Vimu7g02832 302 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 82 288 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02832 Vimu-Chr7 23912832 23915897 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02832 - - gmx:100789437 485.723
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02832 7 23912832 23915897 Vimu7g02832 7 23912832 23915897 ECH
Vimu10g03326 10 43393258 43394990 Vimu7g02832 7 23912832 23915897 ECH
Vimu7g02832 7 23912832 23915897 Vimu11g01078 11 11456189 11460490 PCT
Vimu7g02832 7 23912832 23915897 Vimu7g02832 7 23912832 23915897 PCT