Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu11g01078 ATGGCCGATGATCTCTCTTCCTTCGCTAAGGATGTTTTGCTTGTGAAGAGTTGGAAGAGTTCTACGTTTGTGTGGAGGCTAGTTGTGTTGACCCTTGCCATGGTCAGTGGCGTGTATATATGTTCAATTTGTCTGAAGCAGATAGGCACTGGCACTAAGGTTCGTTTTCTAGAGATCAAGGTTGAACAAAAGCCGTGCCCAGAACCTAACATTGAACCTTGGGAGATTCCTTATGTGCACTACCCTAAACCCAAAACTTACAGCAGGGCGGAATGCGCTTGCCACCCTGTGCGCTATTTTGTTATTCTGTCGATGCAGAGATCTGGGAGTGGATGGTTTGAGACGTTTTTAAATAGTCATGATAACATAAGTTCAAATGGGGAAATATTTTCGGTTAAGGTGAGAAGGAGCAACATTTCAACAATAACAGAGACGCTGGATACAATTTATAATCTAGACTGGTTAAGTAGTGCTTCCAAAAATGAGTGCACCACTGCTGTTGGCTTGAAGTGGATGCTGAATCAGGGATTAATGCAGCATCACGAACAAATTGCTGAGTACTTCAGAATACATGGTGTTTCGCTCATATTTCTTTTCAGAAGGAATCTTTTGCGCCGGATGGTTTCTGTACTTGCAAATGAATATGATAAGAACGCTAAGCTATTAAACGGGACTCACAAATCTCATGTTCATTCACCCAAGGAGGCAGAAGTGCTTGCAAACTACAAGCCTATAATCAATTCAACATTACTGATTGCACAGCTTAGACAAGTGAATGAAACCACCACCAAAGCCTTGGAGTATTTCAAGAGCACCAGGCATATTATCCTGTACTATGAAGATGTGGTAAAAAACCGCACCAAACTAAGGGATGTTCAGGATTTTCTAAAGGTTCCTCAAATGGATTTGAAGAGCCGTCAGGTGAAGATACATAAAGGGTCCTTATCTAGCCAAATTGGAAACTGGAATGATGTAAGCAAGGTACTAACAGGAACACCATTCGAGAGTTTCATCCGTGAAGATTATCGCAGGTAA 1035 0.4184 MADDLSSFAKDVLLVKSWKSSTFVWRLVVLTLAMVSGVYICSICLKQIGTGTKVRFLEIKVEQKPCPEPNIEPWEIPYVHYPKPKTYSRAECACHPVRYFVILSMQRSGSGWFETFLNSHDNISSNGEIFSVKVRRSNISTITETLDTIYNLDWLSSASKNECTTAVGLKWMLNQGLMQHHEQIAEYFRIHGVSLIFLFRRNLLRRMVSVLANEYDKNAKLLNGTHKSHVHSPKEAEVLANYKPIINSTLLIAQLRQVNETTTKALEYFKSTRHIILYYEDVVKNRTKLRDVQDFLKVPQMDLKSRQVKIHKGSLSSQIGNWNDVSKVLTGTPFESFIREDYRR 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu11g01078 344 Gene3D - 97 324 IPR027417 -
Vimu11g01078 344 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 333 IPR027417 -
Vimu11g01078 344 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 7 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu11g01078 Vimu-Chr11 11456189 11460490 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu11g01078 - - gmx:100815094 638.647
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu11g01078 11 11456189 11460490 Vimu11g01078 11 11456189 11460490 ECH
Vimu10g03326 10 43393258 43394990 Vimu11g01078 11 11456189 11460490 ECH
Vimu7g02832 7 23912832 23915897 Vimu11g01078 11 11456189 11460490 PCT