Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g03326 ATGGAATCTAAAGACCCTCCGGATATAAAATCTTTCAAGAAATTCCCATTAACATTGAGGTTTGTAGTTTTAGTAGTGGCCGTCCTTTGTGGAATTTACATTTTCACAATATCTGTAGAGCAAAAAGGTGTAATCACAAGTAACAAGTTGTTAGAAAACACTGTCTTCAAGCAGCCATGTCTTCATCCTCCTGCTGTGGAAGAATGGGAAGTCCCATACTTGCACTATCCAGAACCCAAAACCTTTAGCAGAGAAGAGTGTGGCTGCAATCCTGTTCGGTTTTTCTGCATTGTGTCAATGCAAAGATCTGGGAGCGGTTGGTTTGAGACATTTTTGAACAGTCATATTAATGTAAGCTCTAATGGAGAAATATTTTCAGTAGGCAGAAGAAGGACTAACGTTTCTTCCATTTTGGAGACAATGGATCAAGTTTATAATCTCGACTGGTTTTCTAGTGCCTCCAAGAATGAGTGTTCTGCAGCTGTTGGCTTCAAGTGGATGCTTAATCAGGGTTTGATGGAACATCATGAGGAAATAGGAGAATACTTTGAACGAAGACGAGTTTCTATAATCTTCCTATTCAGAAAGAACTTGCTCCGTAGAATGATATCAGTGCTAGCGAATGCCTATGACAAAGATGCCAAGGCACTGAATGGAACACATAAGTCTCACGTGCACTCTGCAACGGAGGCTAAAATTCTTGCCAACTATAAACCACGGGTGAATATCACATTGCTGATACCAGAGCTAAAGATAATGAAGGAGACAGCAGCAAAAGCCATCACATACTTTAGGAACACTCGCCATATTGTTCTCTATTACGATGATCTTGTCCGCAACCGCACTAAACTGAAGGACGTTCAAGAATTTCTAAGGGTGCCATACAGAGATCTGGAGAGTCGTCAGGTAAAGATACACACTGCCCCATTATCGGAGCAGATTGAAAACTGGGATGAGGTCCAGAAAGAGCTCACAGGGACGCCATTCCAATGGTTTCTCGGAAAAAATTATCAAACACAGTAG 1023 0.4135 MESKDPPDIKSFKKFPLTLRFVVLVVAVLCGIYIFTISVEQKGVITSNKLLENTVFKQPCLHPPAVEEWEVPYLHYPEPKTFSREECGCNPVRFFCIVSMQRSGSGWFETFLNSHINVSSNGEIFSVGRRRTNVSSILETMDQVYNLDWFSSASKNECSAAVGFKWMLNQGLMEHHEEIGEYFERRRVSIIFLFRKNLLRRMISVLANAYDKDAKALNGTHKSHVHSATEAKILANYKPRVNITLLIPELKIMKETAAKAITYFRNTRHIVLYYDDLVRNRTKLKDVQEFLRVPYRDLESRQVKIHTAPLSEQIENWDEVQKELTGTPFQWFLGKNYQTQ 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g03326 340 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 8 338 - -
Vimu10g03326 340 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 93 300 IPR027417 -
Vimu10g03326 340 Gene3D - 92 324 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g03326 Vimu-Chr10 43393258 43394990 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g03326 - - gmx:100808615 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g03326 10 43393258 43394990 Vimu7g02832 7 23912832 23915897 ECH
Vimu10g03326 10 43393258 43394990 Vimu11g01078 11 11456189 11460490 ECH
Vimu10g03326 10 43393258 43394990 Vimu10g03326 10 43393258 43394990 ECH