Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g02056 TTGCACAGTGAGGCGAGGGAGAGGGAGAAGAGGAGTGGTGCAATGTCCATGAAGAACAAGGGTGGAGGTGTAGAACTGAATGCACGGAACGTCCTGCAGAGGAAATGGGCTCTTCTGCTCTGTTTGGCAAGCTTCTGTGCTGGAATGTTCTTCACAAATAGGATATGGTCGATGCCTGAATATGTAGAATTTCCAGGGACTACTAGTGAGATTGAAAGAATAAAATTAAAATCTGATGGTTGTAATCTAAATCCAGTAAGTGTTTCGGTTACTCTTTTGCACATATTGTATTTTTTGTATATGTTGCAAGGCAAAACTCAAATTACAGTAAAGTGGAAGTTTCAAATACAGAGAATGTTGTCAAGAATGTTGTCAAGAATGATGTCAAGAGACCAAGTAAGACAATCTACGTTGGAGGTGAATCTTAAATTTGCTTTGCTGCTTCCTGAATTTATGCTGAATGGTTGTGCTGTATCAGGGAAGTCAGAGACAATTGAATCAAGTACCGGGAAAAAATATTTCATGGTTATAGGGATCAATACAGCTTTTAGTAGCAGGAAACGAAGAGATTCTGTTCGTACAACTTGGATGCCACAAGCTAATGAAAGACAAAAGTTGGAGGAAGAAAAGGGAATAATAATACGATTTGTTATAGGTCACAGTTCTACATCTGGTGGAATTCTTGACAAAGCTATTGAAGCAGAGGAGAGGCTTCATGCTGACTTTTTGAGGCTGAACCACGTTGAGGGATACCTAGAACTATCAGCTAAGACAAAGACCTACTTTTCGACTGCTGTTGCCTTGTGGGATGCGGAATTTTATGTTAAAGTTGATGATGATGTTCATGTCAATTTAGCAACACTTGGATTGTCTTTGAGCATGCACCGAATGAAACCTCGGGTGTATGTTGGGTGCATGAAATCCGGTCCTGTCCTTGCTCAGAAGGGAGTGAAATACCATGAACCAGAATACTGGAAGTTTGGAGAGGTGGGAAACAAGTACTTCCGTCATGCTACAGGACAATTATATGCCATTTCCCAAGATTTGGCTACTTATATATCAAGAAATCAGGATGTGCTTCATAAATATGCCAACGAAGATGTCTCATTGGGATCTTGGTTTATTGGTTTAGACGTAGAGCATGTTGATGATAGGAGAATGTGTTGTGGCACACCCCCTGATTGCGAGTGGAAGGTGCAGGCTGGTAACGTATGTGTTGCTTCGTTTGATTGGAAATGCAGTGGAATCTGCAGGTCTGTAGAGAGGATGAAAGAAGTTCACCTGCGTTGTGGGGAGGATGAAAACGCTTTGTGGAGTGCAACCTTGTAA 1329 0.4146 MHSEAREREKRSGAMSMKNKGGGVELNARNVLQRKWALLLCLASFCAGMFFTNRIWSMPEYVEFPGTTSEIERIKLKSDGCNLNPVSVSVTLLHILYFLYMLQGKTQITVKWKFQIQRMLSRMLSRMMSRDQVRQSTLEVNLKFALLLPEFMLNGCAVSGKSETIESSTGKKYFMVIGINTAFSSRKRRDSVRTTWMPQANERQKLEEEKGIIIRFVIGHSSTSGGILDKAIEAEERLHADFLRLNHVEGYLELSAKTKTYFSTAVALWDAEFYVKVDDDVHVNLATLGLSLSMHRMKPRVYVGCMKSGPVLAQKGVKYHEPEYWKFGEVGNKYFRHATGQLYAISQDLATYISRNQDVLHKYANEDVSLGSWFIGLDVEHVDDRRMCCGTPPDCEWKVQAGNVCVASFDWKCSGICRSVERMKEVHLRCGEDENALWSATL 442
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g02056 442 MobiDBLite consensus disorder prediction 1 21 - -
Vimu7g02056 442 Pfam Galactosyltransferase 187 384 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu7g02056 442 MobiDBLite consensus disorder prediction 1 15 - -
Vimu7g02056 442 PANTHER BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE 146 386 IPR002659 GO:0006486|GO:0016020|GO:0016758
Vimu7g02056 442 FunFam Hexosyltransferase 167 388 - -
Vimu7g02056 442 Pfam Domain of unknown function (DUF4094) 34 82 IPR025298 -
Vimu7g02056 442 Gene3D - 166 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g02056 Vimu-Chr7 18357162 18362325 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vimu7g02056 15 442 Glycosyltransferase AT1G05170 62.500 0.0 557
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g02056 K20855 - gmx:100810168 602.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g02056 7 18357162 18362325 Vimu7g02056 7 18357162 18362325 ECH
Vimu4g00887 4 7206237 7210532 Vimu7g02056 7 18357162 18362325 ECH
Vimu5g01610 5 27614979 27617665 Vimu7g02056 7 18357162 18362325 ECH