Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu7g00595 ATGGGTTCTGCTAACGGACTGATTAACGCAGAGAGGAAACAGCCTCTATTTTCTTTTGGATTGATATCAGACGTGCAGTATGCTGACATTCCTGATGGTAGGTCATTTCTCGGTGTTCCACGTTACTATAGGCACAGCATTCATGTATTGCAGAGAGCAGTAAAACATTGGAATACTAATAAGAACCACAAGTTTGTGATAAATTTTGGAGATATCGTTGATGGTTACTGTCCGAAAGATCAATCTCTTAACACTGTAAAGAAAATTGTTAATGAATTTGAGATGTTCAATGGACCAGTTTATCATTTGATTGGCAATCACTGCCTTTACAATCTGCCTCGGAGTAAGTTACTTCCATTATTGAAAATCAAGAGTTTTGGAAGCCATGCTTACTATGAATTTTCGCCAGTGCCAGAATATAGATTTGTAGTCCTTGATGGCTATGACATAAGTGCAATTGGCTGGCCACAAGACCATCCAAAAACATTGGAGGCCTTGAAATTCCTCCGGGAAAAGAATCCGAACGATGACAAGAACAGTCCGACAGGTTTGGTGGGCCTCGAAAGAAGGTTTCTTATGTTCAATGGGGCTGTTGGAAAGGAACAAATGGAATGGTTGAACAGTGTTCTTCAGGAAGCAACAAAATTGGAACAGAAGGTAGTGATATGCTGCCACATGCCTCTAGATCCTGTTGCATCATCCAACGAGGCACTGCTATGGAATTACGATGAAGTAATGAATTTGATTCACAGATACACTTGTGTAAAGTTGTGTGTATCTGGACATGATCACAAAGGAGGGTATTCCGTTGATTCCCATGGAATTCACCATAGAGTTCTTGAAGCTGCCCTGGAATGTCCTGCTGGCACGGATTCGTTTGGATATGCTGAAGTTTTTGACGACAAAATATTACTTTATGGTACGGGCAGAATGCTGAGTAAAGACATTTACTTTCATTCTTCAGCAGATTTGTAA 975 0.4051 MGSANGLINAERKQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSIHVLQRAVKHWNTNKNHKFVINFGDIVDGYCPKDQSLNTVKKIVNEFEMFNGPVYHLIGNHCLYNLPRSKLLPLLKIKSFGSHAYYEFSPVPEYRFVVLDGYDISAIGWPQDHPKTLEALKFLREKNPNDDKNSPTGLVGLERRFLMFNGAVGKEQMEWLNSVLQEATKLEQKVVICCHMPLDPVASSNEALLWNYDEVMNLIHRYTCVKLCVSGHDHKGGYSVDSHGIHHRVLEAALECPAGTDSFGYAEVFDDKILLYGTGRMLSKDIYFHSSADL 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu7g00595 324 PANTHER - 10 319 - -
Vimu7g00595 324 Pfam Calcineurin-like phosphoesterase 18 265 IPR004843 GO:0016787
Vimu7g00595 324 SUPERFAMILY Metallo-dependent phosphatases 15 311 IPR029052 -
Vimu7g00595 324 CDD MPP_Nbla03831 17 305 IPR041869 -
Vimu7g00595 324 Gene3D - 12 311 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu7g00595 Vimu-Chr7 6049381 6050355 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu7g00595 K01517 - gmx:100808714 606.675
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00595 7 6049381 6050355 Vimu7g00595 7 6049381 6050355 ECH
Vimu7g00595 7 6049381 6050355 Vimu10g01331 10 13949877 13950842 PCT
Vimu10g01326 10 13907305 13908544 Vimu7g00595 7 6049381 6050355 PCT