Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01331 ATGGTACTTTCTTCTAGTGGACTTACTACTACGCAGCCACTTTTTTCTTTTGGATTGATTTCGGATGTGCAATATGCTGATATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGGTATTACAGGCACAGTATTCTTGTGTTGCAGAGAGCAGTTAAAGAATGGAACACTCACCAGAAGCATAAGTTTGTGATCAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGGTGCTGTACAGAAAGTTGTGGACGAATTTGAGATGTTCAGGGGAGGACCTGTGTATCATATGATTGGCAATCACTGCCTATACAATCTCCCTCGCAGCAAGTTACTTCCATTATTGAAGATCCAAAGTCTTGATGGCCGTGCATACTATGATTTCTCACCAGTGCCTGAGTATAGGTTCGTAGTTCTAGATGGTTATGACATCAGTGCCATTGGTTGGCCCCAAGACCATCCAAAATCATTGGAGGCCATGGAAATCCTAAGGGAGAAGAACCCAAATGAAAATAAAAATAGTCCAACGGGTATGGAGGGGCTTGAAAGAAGGTTTCTCATGTTCAATGGAGGCATTGGAAGGGAACAGATGGAATGGTTGGATGGTGTTCTCCTGGAAGCAACAAAAAAGAAGCAGAAGGTGGTTGTTTGTTGCCATCTGCCTTTAGATGCCTGTGCAGCAAGTGAGAAGGGACTGTTATGGAATTATGATGAAGTAATGAATTTGATACATAGATACAACTGTGTTAAGGTATGTCTTGCTGGACATTATCATAAAGGAGGATACTCTATTGATTCTCATGGGATACACCATAGAATTATTGAAGCCGCTTTGGAATGTCCTCTTGGTACAAATGCATTTGGACACATTGATGCCTATCATGACAGATTATCTCTTGTTGGAACTGACAGAATGAAAAGTACAGACATGCATTTTTATCCTACAAGTTAG 966 0.411 MVLSSSGLTTTQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTHQKHKFVINFGDIVDGFCPKDQSLGAVQKVVDEFEMFRGGPVYHMIGNHCLYNLPRSKLLPLLKIQSLDGRAYYDFSPVPEYRFVVLDGYDISAIGWPQDHPKSLEAMEILREKNPNENKNSPTGMEGLERRFLMFNGGIGREQMEWLDGVLLEATKKKQKVVVCCHLPLDACAASEKGLLWNYDEVMNLIHRYNCVKVCLAGHYHKGGYSIDSHGIHHRIIEAALECPLGTNAFGHIDAYHDRLSLVGTDRMKSTDMHFYPTS 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01331 321 Pfam Calcineurin-like phosphoesterase 16 264 IPR004843 GO:0016787
Vimu10g01331 321 Gene3D - 10 310 IPR029052 -
Vimu10g01331 321 SUPERFAMILY Metallo-dependent phosphatases 13 312 IPR029052 -
Vimu10g01331 321 PANTHER - 8 317 - -
Vimu10g01331 321 CDD MPP_Nbla03831 15 304 IPR041869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01331 Vimu-Chr10 13949877 13950842 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01331 K01517 - gmx:100815255 599.356
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu7g00595 7 6049381 6050355 Vimu10g01331 10 13949877 13950842 PCT