Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu10g01326 ATGAAAGGACACGTAGAGATAAACGCCATGGTTTCTTCTCGTGGTCTAACTACTACGCAACCACTTTTTTCTTTTGGATTGATTTCTGATGTCCAATATGCTGATATTCCTGATGGTCGCTCATTCCTTGGTGTTCCACGATATTATAGGCACAGTATACTTGTGTTGCAGAGAGCGGTTAAAGAATGGAATACTCATCAGAAGCATATGTTTGTGATTAATTTTGGAGATATTGTTGATGGGTTTTGTCCCAAAGATCAATCTCTTGGTACTGTACAGAAAGTTGTGGACGAATTTGAGAAGTTCAAGGGGGGACCTGTGTATCATATGATTGGAAATCACTGCCTATACAATCTCCCTCGCAGCCAGTTGCTTCCGTTATTGAAGATCCGAAGTCTTGATGGCCGTGCATACTATGATTTTTCACCGGTGCCTGAATATAGATTTGTAGTTCTGGATGCCTATGACATCAGTGCCATTGGTTGGCCACAAGATCATCCCAAAACATTGGAGGCCATGAAAATCCTTCGGGAGAAGAATCCAAATGAAAATATGAACAGTCCAGATAATTTGGTGGGGCCTGAAAGAAGGTTTGTCATGTTTAATGGGGGTCTTGGAAAGGAACAGATGGAATGGTTGGATGGAGTTCTCCTGGATGCGACAATATTGAATCAGAAGGTGATTGTCTGTTGCCATTTGCCTCTGGATACTGGTGCGGCAAATTTGGATACACTGTTGTGGAATTATGATGAAGTAATGAATTTGATACACAGATACAATTGCGTTAAGGCCTGTCTCGCAGGGCATGATCATATAGGTGGATACTCCATTGATTCTCATGGGATACACCATAGAGTTTTTGAGGCTGCTTTGGAATGTCCTCCTGGTACGAGTGCATTTGGATACATTGAAGTCTACGACGACAGGATATCACTAATTGGAACTGACAGACTGGAAAGTACAGACATGCATTTTAGCCCCCGAAGTTAA 990 0.4202 MKGHVEINAMVSSRGLTTTQPLFSFGLISDVQYADIPDGRSFLGVPRYYRHSILVLQRAVKEWNTHQKHMFVINFGDIVDGFCPKDQSLGTVQKVVDEFEKFKGGPVYHMIGNHCLYNLPRSQLLPLLKIRSLDGRAYYDFSPVPEYRFVVLDAYDISAIGWPQDHPKTLEAMKILREKNPNENMNSPDNLVGPERRFVMFNGGLGKEQMEWLDGVLLDATILNQKVIVCCHLPLDTGAANLDTLLWNYDEVMNLIHRYNCVKACLAGHDHIGGYSIDSHGIHHRVFEAALECPPGTSAFGYIEVYDDRISLIGTDRLESTDMHFSPRS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu10g01326 329 SUPERFAMILY Metallo-dependent phosphatases 21 320 IPR029052 -
Vimu10g01326 329 Pfam Calcineurin-like phosphoesterase 24 272 IPR004843 GO:0016787
Vimu10g01326 329 CDD MPP_Nbla03831 23 312 IPR041869 -
Vimu10g01326 329 PANTHER - 11 326 - -
Vimu10g01326 329 Gene3D - 18 318 IPR029052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu10g01326 Vimu-Chr10 13907305 13908544 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu10g01326 K01517 - gmx:100792911 588.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu10g01326 10 13907305 13908544 Vimu10g01326 10 13907305 13908544 ECH
Vimu10g01326 10 13907305 13908544 Vimu7g00595 7 6049381 6050355 PCT