Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vimu6g02735 ATGGCGTTCTCTTCGTTTCTCGGCAGAGTCCTCTTTGCGTCCGTTTTCATCCTCTCTGCTTACCAAGAATTTAATGCTTATGGGGTTGATGGCGGACCCGCAGCAAAAGCACTGAGACCGAAGTTTGATGCATTTGCCCATCAAGTACATTCTAGAGTTGGATTTCAACTTCCGGATATCCATATGAAGTTTTTAGTTGCTGGGGCTATTGCTCTCAAGGGCATTGGAGGGATTCTTTTCATACTTGGCAGCTCTTTTGGAGCTCTCCTTTTGCTTTTGCATCAATTGATTACTACTCCTATACTGTATGATTTCTACAATTATGACAGCGAGGACAAAGAATTTATTCAACTTTTCATCAAATTTACTCAGAATATGGCCCTCTTCGGGGCTTTGTTGTTTTTCGTTGGGATGAAAAACTCCATTCCTAGAAGGCAACCCAAGAAGAAGGCTCCCAAAACAAAAACTTATTAG 474 0.4177 MAFSSFLGRVLFASVFILSAYQEFNAYGVDGGPAAKALRPKFDAFAHQVHSRVGFQLPDIHMKFLVAGAIALKGIGGILFILGSSFGALLLLLHQLITTPILYDFYNYDSEDKEFIQLFIKFTQNMALFGALLFFVGMKNSIPRRQPKKKAPKTKTY 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vimu6g02735 157 PANTHER HR-LIKE LESION-INDUCER 1 156 - -
Vimu6g02735 157 Pfam HR-like lesion-inducing 1 138 IPR008637 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vimu6g02735 Vimu-Chr6 23902031 23904813 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vimu6g02735 - - gmx:100817488 252.677
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vimu6g02735 6 23902031 23904813 Vimu6g02735 6 23902031 23904813 ECH
Vimu6g02735 6 23902031 23904813 Vimu3g00123 3 960522 962327 PCT
Vimu3g01286 3 22873385 22874409 Vimu6g02735 6 23902031 23904813 PCT